Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto12g0808 | ATGGAGATTGTGATTTGTCTGATTCTACTCTTTCTGGGTATCGCTGTTTTGGTGTTGATTCATGTGTGCATGGTGTGGAGGGCTTTCGGGGGAGGAAGTGAAGAAcagagtggtggtggtggtggtggtgatgggaTCGTGAGAAAGAGAATGTGCAGAGAGGAGTTGAAGAATCTTCCTTGCTTTGAGTACAAGGAAGGAAAGAAAGGAGGAGATGGGAGCCTTGTGGATTGTGCTGTTTGTTTAGAGAGCTTCAAGGTTGGTGATTTATGCAGGTTTTTGCCTATGTGCAGACATACCTTCCATGTCCCCTGCATAGATTCCTGGATTCTCAACACACCCATTTGTCCTATTTGTCGAACCTGGGTTCATTTGATCCAACAAGTTGATGTTTCAGATAATGTTCGGATCCAAGTTGTATAG | 423 | 0.4043 | MEIVICLILLFLGIAVLVLIHVCMVWRAFGGGSEEQSGGGGGGDGIVRKRMCREELKNLPCFEYKEGKKGGDGSLVDCAVCLESFKVGDLCRFLPMCRHTFHVPCIDSWILNTPICPICRTWVHLIQQVDVSDNVRIQVV | 140 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto12g0808 | 140 | ProSiteProfiles | Zinc finger RING-type profile. | 78 | 120 | IPR001841 | - | |
Sto12g0808 | 140 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 129 | - | - | |
Sto12g0808 | 140 | SUPERFAMILY | RING/U-box | 55 | 126 | - | - | |
Sto12g0808 | 140 | Pfam | Ring finger domain | 77 | 120 | IPR001841 | - | |
Sto12g0808 | 140 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 45 | 124 | IPR013083 | - | |
Sto12g0808 | 140 | SMART | ring_2 | 78 | 119 | IPR001841 | - | |
Sto12g0808 | 140 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE | 1 | 129 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto12g0808 | Sto-Chr12 | 5089567 | 5089989 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto12g0808 | 56 | 140 | C3H Transcription Factor Family | AT5G17600 | 38.824 | 1.49e-16 | 72.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto12g0808 | - | - | gmx:102662675 | 155.606 |