Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0806 ATGAAGGACGGGAGCGATGGGTTTGTGAGGGCCGATCAGATTGATCTCAAGACCATAGATGAGCAGCTGGAGAGGCACTTGAACAAGGCATTGACTATGGAGAAGAACAGGAGGAAAGATGAAGATGTTATTGCTACTACTAATATTGATATCAGTCCTCGTGCCGTTAAAACCACTGCTGCCCTTGCCTTCAGGAAGCAAAGGCAGGAATGGGAGATTGACCCTTCCAACCTCATCATCAAGACTGTTATCGCTCGTGGAACTTTCGGCACCGTCCACCGCGGTCTCTACGACACCCAGGACGTCGCTGTTAAATTGCTGGACTGGGGTGAAGAAGGCCACAGGAGTGAAGCTGAAATTGCTTCACTAAGGTCAGCGTTTATGCAGGAAGTTGCGGTTTGGCATAAACTTGATCATCCCAATGTCACCAAGTTTATCGGAGCAATAATGGGGTCAGCAGAACTACAGATACAAACTGATGATGGTCTTATCAGCATGCCAAGCAATGTGTGCTGTGTTGTTGTGGAGTATCTTCCCGGGGGTCTGAAATCTTACCTAATAAAAAACAGGAGAAGGAAGTTACCTTTTAAGGTTGTCATCCAGCTGGCACTAGATCTTGCAAGAGGGCTGAGTTATCTGCATTCTCAAAAGATTGTCCACAGAGATGTAAAGACAGAGAATATGCTATTGGATAAGTCTCGTACAGTTAAAATTGCTGATTTTGGGGTTGCACGCGTTGAGGCTTCAAATCCCAATGACATGACAGGCGAGACTGGTACCCTTGGTTACATGGCCCCAGAGGTATTAAATGGCAATCCCTATAACAGGAAGTGTGATGTGTACAGCTTTGGCATCTGTTTATGGGAGATATATTGTTGTGACATGCCGTACCCTGACCTAACTTTCTCAGAGGTTACCTCAGCAGTCGTTCGTCAGAATCTGAGACCAGAAATACCAAGATGTTGCCCAAGCTCTATAGCAAATGTTATGAAAAGATGCTGGGATGCAAATCCAGACAAGCGGCCAGAGATGGATGAAGTGGTTTCCATGCTAGAAGCCATTGACACATCAAAAGGTGGAGGTATGATCCCCGTCGATCAGCAGCAAGGTTGTTTTTGTTTTCGCAAGAACAGAGGACCATAA 1143 0.4593 MKDGSDGFVRADQIDLKTIDEQLERHLNKALTMEKNRRKDEDVIATTNIDISPRAVKTTAALAFRKQRQEWEIDPSNLIIKTVIARGTFGTVHRGLYDTQDVAVKLLDWGEEGHRSEAEIASLRSAFMQEVAVWHKLDHPNVTKFIGAIMGSAELQIQTDDGLISMPSNVCCVVVEYLPGGLKSYLIKNRRRKLPFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKSRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLTFSEVTSAVVRQNLRPEIPRCCPSSIANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPVDQQQGCFCFRKNRGP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0806 380 Gene3D Phosphorylase Kinase; domain 1 66 160 - -
Sto12g0806 380 SMART serkin_6 78 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0806 380 PANTHER - 1 374 - -
Sto12g0806 380 SUPERFAMILY Protein kinase-like (PK-like) 59 351 IPR011009 -
Sto12g0806 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Sto12g0806 380 ProSiteProfiles Protein kinase domain profile. 78 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0806 380 PRINTS Tyrosine kinase catalytic domain signature 212 230 IPR001245 GO:0004672|GO:0006468
Sto12g0806 380 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672|GO:0006468
Sto12g0806 380 PRINTS Tyrosine kinase catalytic domain signature 322 344 IPR001245 GO:0004672|GO:0006468
Sto12g0806 380 Gene3D Transferase(Phosphotransferase) domain 1 179 370 - -
Sto12g0806 380 Pfam Protein tyrosine and serine/threonine kinase 80 351 IPR001245 GO:0004672|GO:0006468
Sto12g0806 380 Coils Coil 16 36 - -
Sto12g0806 380 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 374 - -
Sto12g0806 380 CDD STKc_MAP3K-like 84 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0806 Sto-Chr12 5082164 5085476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0806 1 312 MAP Kinase Kinase Kinase AT5G50000 81.505 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto12g0806 PK_Tyr_Ser-Thr 3.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0806 - - gmx:100807921 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1432 3 10484621 10485858 Sto12g0806 12 5082164 5085476 ECH
Sto12g0806 12 5082164 5085476 Sto12g0806 12 5082164 5085476 ECH