Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0799 ATGAAGAACTTCTACGGCGGGTTCAAGCAAATCTCGAGCAGCAGGAGGTCAGGGAGGAGGCTTTCGCTTGGGGAATACAAGCGAGCAGTGTCATGGTCCAAGTACTTGATCTCTTCAGGTGCTGCCAtcaaaggagaaggagaagaggaatggAGTGCTGACATGTCTCAGCTTTTCATTGGCTCCAAGTTTGCTTCTGGTAGGCATAGCAGGATCTACAGAGGCATCTACAAGCAGAGGGATGTCGCCATCAAGCTCATCAGCCAGCCTGAGGAAGAGGAAGACTTGGCTGTCTCCCTTGAGAAGCAATTCACTTCTGAGGTTGCTCTCCTCTTTCGCTTGCATCATCCTAATATCATCACTTTTGTTGCTGCTTGCAAGAAACCTCCAGTGTTTTGTATAATTACAGAATACATGGGAGGGGGATCATTGAGGAACTACCTGCGACAGCAACAACCAAATACAGTCCCACACAAACTTGTTCTGAAACTGGCACTAGACATTGCACGTGGGATGCAGTATCTTCATTCAGAGGGGATACTTCATAGGGATCTCAAGTCAGAGAATCTATTGCTGGGGGAAGACATGTGTGTGAAAGTAGCAGATTTTGGAATCTCATGCTTGGAATCTCAGATTGGAAGTGCCAAAGGATTCACCGGAACATACCGGTGGATGGCGCCTGAGATGATCAAAGAAAAGCATCACACCAAGAAAGTAGATGTCTATAGTTTTGCCATAGTCCTATGGGAGCTCTTAACAGGACTCACTCCATTTGAAAACATGACACCAGAACAGGCAGCATATGCAGTTTCCCATAAGAATGCGAGGCCGACATTGCCATCGGAATGTCCAAGGGCTTTTAGTGGTCTCATAAACAGATGCTGGTCAAGCAATCCAGAGAAAAGGCCACATTTTGATGAGATAGTTTGGATATTGGAGAGCTATAATGAATCCATTGAAGAGGATCCAGAGTTTTTGTCAACTTATAGGCCTCCTTCTTCTAATGTTATTCTCAGATGCTTACCACAATGTGTAACTGGCAATACATGTTCTTGCAaggcttaa 1065 0.4394 MKNFYGGFKQISSSRRSGRRLSLGEYKRAVSWSKYLISSGAAIKGEGEEEWSADMSQLFIGSKFASGRHSRIYRGIYKQRDVAIKLISQPEEEEDLAVSLEKQFTSEVALLFRLHHPNIITFVAACKKPPVFCIITEYMGGGSLRNYLRQQQPNTVPHKLVLKLALDIARGMQYLHSEGILHRDLKSENLLLGEDMCVKVADFGISCLESQIGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFAIVLWELLTGLTPFENMTPEQAAYAVSHKNARPTLPSECPRAFSGLINRCWSSNPEKRPHFDEIVWILESYNESIEEDPEFLSTYRPPSSNVILRCLPQCVTGNTCSCKA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0799 354 PANTHER SERINE-THREONINE PROTEIN KINASE 1 334 - -
Sto12g0799 354 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 1 334 - -
Sto12g0799 354 Pfam Protein tyrosine and serine/threonine kinase 60 310 IPR001245 GO:0004672|GO:0006468
Sto12g0799 354 ProSiteProfiles Protein kinase domain profile. 58 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0799 354 SUPERFAMILY Protein kinase-like (PK-like) 47 312 IPR011009 -
Sto12g0799 354 PRINTS Tyrosine kinase catalytic domain signature 136 149 IPR001245 GO:0004672|GO:0006468
Sto12g0799 354 PRINTS Tyrosine kinase catalytic domain signature 174 192 IPR001245 GO:0004672|GO:0006468
Sto12g0799 354 PRINTS Tyrosine kinase catalytic domain signature 220 230 IPR001245 GO:0004672|GO:0006468
Sto12g0799 354 PRINTS Tyrosine kinase catalytic domain signature 239 261 IPR001245 GO:0004672|GO:0006468
Sto12g0799 354 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Sto12g0799 354 SMART serkin_6 58 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0799 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Sto12g0799 354 Gene3D Phosphorylase Kinase; domain 1 48 139 - -
Sto12g0799 354 CDD STKc_MAP3K-like 65 312 - -
Sto12g0799 354 Gene3D Transferase(Phosphotransferase) domain 1 141 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0799 Sto-Chr12 5048635 5051031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0799 31 346 MAP Kinase Kinase Kinase AT1G62400 60.436 6.02e-136 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto12g0799 PK_Tyr_Ser-Thr 1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0799 - - gmx:100778530 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1426 3 10415912 10418713 Sto12g0799 12 5048635 5051031 CCT
Sto12g0799 12 5048635 5051031 Sto12g0799 12 5048635 5051031 ECH