Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0797 ATGGAAGGTGAACATTGTGAATACAAGAAGGGGCTATGGAGTTCAGAGGAAGACAGAGTTTTAATGGATTACGTGAAGCAGCAAGGAGTAGGCAAGTGGAATCGCATCGCTAAACTCAcagGGTTGAAGAGGTGTGGGAAGAGTTGTAGATTGAGGTGGATCAACTATCTGAGTCCAGATGTGAAGCGTGGAGGCTTCACTGAGGAAGAAGACGACCTTATTATTCGTCTCCACAATCTCCTCGGAAATAGGTGGTCTTTGATAGCAGGGAGGGTGCCAGGAAGAACAGACAACCAAGTGAAGAATTATTGGAACACTCATTTGAGCAAAAAGGTAAAGGGTGTTCACAATTACAAGATTAATAAAGGAAAGAGTACCAAATTATCCCACACTCAACCCCCTAATCCCAATGCAAATCCAAACCCATCACACCTCCCTCCACGTGATGATCAAATTCAACCAAACCACGCCGTGCTTGCTTCTTCTGAATGTGACCAAAAAGGTGAAGCTCAAAAGTTAGTGGAAAGCAGTAGTGGTAGGTGCATGAATAGTAGTAGTGTGCATGATCTTGAGTTGGTGATAATGGAAGATGATTATTTTTTGGAGAGCAGCTTTTGGTTTGCTGACATTCACAGTGCTGGGTTTGGGCTTCTTCCCTCTTACCATGACTATTTTCCTGACCTTGATTGGGCTGCCTTGTAA 702 0.4359 MEGEHCEYKKGLWSSEEDRVLMDYVKQQGVGKWNRIAKLTGLKRCGKSCRLRWINYLSPDVKRGGFTEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNYWNTHLSKKVKGVHNYKINKGKSTKLSHTQPPNPNANPNPSHLPPRDDQIQPNHAVLASSECDQKGEAQKLVESSSGRCMNSSSVHDLELVIMEDDYFLESSFWFADIHSAGFGLLPSYHDYFPDLDWAAL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0797 233 MobiDBLite consensus disorder prediction 124 152 - -
Sto12g0797 233 Gene3D - 65 135 - -
Sto12g0797 233 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Sto12g0797 233 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 4 213 - -
Sto12g0797 233 CDD SANT 13 57 IPR001005 -
Sto12g0797 233 CDD SANT 66 108 IPR001005 -
Sto12g0797 233 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Sto12g0797 233 Pfam Myb-like DNA-binding domain 63 108 IPR001005 -
Sto12g0797 233 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Sto12g0797 233 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 4 213 - -
Sto12g0797 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Sto12g0797 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 57 IPR017930 -
Sto12g0797 233 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Sto12g0797 233 Gene3D - 10 62 - -
Sto12g0797 233 SMART sant 62 110 IPR001005 -
Sto12g0797 233 SMART sant 9 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0797 Sto-Chr12 5036290 5037499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0797 2 144 MYB Transcription Factor Family AT3G27920 64.384 2.81e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto12g0797 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0797 K09422 - csin:114259869 216.853