Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0780 ATGGTGGATATGAATAATCAAAGCTATGTGGCTTATAATTCTCATCAAGAATTAACGAAGCCTGTGGATTTTGTTATAGCAGATGAAGTCTCATGCATATCACCTTCTTCAGTGGATTTTTACAAAAGAGTTGGCTTCaattataaaaagaataatagGGCATCATCTCTAAGCACTAGAAGGACGAATCTCAAAGTTCGCAAGAAGTCCAACATGGTAAAAGGCCAATGGACCATAGAAGAAGATagGGTGttgattcaattggtggaaCAATATGGATTGAGGAAGTGGTCTCATATTGCTCAAATGTTGCCTGGAAGAATAGGCAAACAATGCAGAGAAAGATGGCACAATCATCTAAAGCCTGACATAAAGGCAGAAGGAGACATGGACAGAAGAGGAGGACAAAATTCTGATAGAAGCGCATGGAGAAGTAGGAAACAAATGGGCAGAGATAGCAAAGAGATTGGTGGGAAGAACAGAAAACTCAATAAAGAACCATTGGAATGCAACAAAAAGAAGGCAATACTCTAA 534 0.3689 MVDMNNQSYVAYNSHQELTKPVDFVIADEVSCISPSSVDFYKRVGFNYKKNNRASSLSTRRTNLKVRKKSNMVKGQWTIEEDRVLIQLVEQYGLRKWSHIAQMLPGRIGKQCRERWHNHLKPDIKAEGDMDRRGGQNSDRSAWRSRKQMGRDSKEIGGKNRKLNKEPLECNKKKAIL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0780 177 PANTHER BNAC07G50190D PROTEIN 16 156 - -
Sto12g0780 177 CDD SANT 77 120 IPR001005 -
Sto12g0780 177 ProSiteProfiles Myb-like domain profile. 69 120 IPR001005 -
Sto12g0780 177 MobiDBLite consensus disorder prediction 121 177 - -
Sto12g0780 177 SUPERFAMILY Homeodomain-like 69 126 IPR009057 -
Sto12g0780 177 SMART sant 73 122 IPR001005 -
Sto12g0780 177 Pfam Myb-like DNA-binding domain 74 120 IPR001005 -
Sto12g0780 177 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 124 IPR017930 -
Sto12g0780 177 PANTHER MYB PROTEIN-RELATED 16 156 - -
Sto12g0780 177 Gene3D - 73 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0780 Sto-Chr12 4898558 4899554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0780 17 157 MYB Transcription Factor Family AT4G18770 54.545 1.02e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto12g0780 Myb_DNA-binding 3.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0780 K09422 - gmx:100781456 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0780 12 4898558 4899554 Sto12g0780 12 4898558 4899554 ECH