Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0779 TTGGAAAGGGCTGGATTTTGGAGTGCAATGGCTTCCAATTTGACAAATCAATCTCGCAATGTTCTTAGCAAAAAAGTCATGGCTAAGAAGGAgGAATCTATAGACAATATAACCCTCTTCTCAATAATTACGATTATGTCATTCTTCTTGTTAGCACCTGTGACTGTATTCATGGAGGGTGTCAAATTTACCCCTGCATACCTGCAATCTGCTGGGTTGAATGTTGGACAAGTATACACCAGATCACTTATTGCTGCACTATGTTTCCATGCATATCAGCAAGTTTCTTATATGATATTGCAGAGGGTATCACCTGTTACCCATTCTGTGGGTAATTGTGTGAAGCGGGTCGTGGTCATTGTGAGCTCTGTCATCTTCTTCCAAACACCTGTCTCACCCATTAACGCTTTTGGGACTGGCATAGCACTTGCTGGCGTTTTCCTCTATTCAAGGGTGAAGCGAATTAAGGCAAAGCCGAAGACAGCATAG 489 0.4233 LERAGFWSAMASNLTNQSRNVLSKKVMAKKEESIDNITLFSIITIMSFFLLAPVTVFMEGVKFTPAYLQSAGLNVGQVYTRSLIAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINAFGTGIALAGVFLYSRVKRIKAKPKTA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0779 162 SUPERFAMILY Multidrug resistance efflux transporter EmrE 74 153 - -
Sto12g0779 162 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 5 136 - -
Sto12g0779 162 Pfam Triose-phosphate Transporter family 4 150 IPR004853 -
Sto12g0779 162 PANTHER SOLUTE CARRIER FAMILY 35 5 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0779 Sto-Chr12 4893966 4895431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0779 4 162 Antiporters AT5G33320 85.535 1.70e-87 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0779 K15283 - gmx:100804563 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1409 3 10293007 10296291 Sto12g0779 12 4893966 4895431 CCT
Sto3g1409 3 10293007 10296291 Sto12g0779 12 4893966 4895431 ECH
Sto12g0779 12 4893966 4895431 Sto12g0779 12 4893966 4895431 ECH