Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0773 ATGTGTGGGTCTTCCCAATACCACGATGGCCAAAACCTAATTCAAATTTTTCTATCCCTAATGGACATTTTGGCCAATAAGGTGAATGAAAAAGGATGGGCAGCCGAGTCCATTTATGGCACGTCGTTTGCAATGTACGCCTTAGGTCAATGCCATCACGATCTCGATTCTAAACAATGTGTCGCCTGCTTCACCAAGGCCCGAGAATCGCTACCCAAATGTCTACCTTCTTTGTCGGGTCGGATATACCTAGATGGTTGCTTTCTTCGATACGACAATTATCAATTCTTCAACGAAAGTAAGGATGAGACTCATGACAAATGCGATTGTCAGGGGCCACCGAAATATGTGCAAGATAACCCAAGCTTCAAATTAGGGTTCGAGAAGCAAGTGATGTCGGTGGTTTCGAATGTAACGAAGGATGCAGCGAAACATAAATTCGCGGTGGGACGAAAGAGAGGTGGAGTAGAGAAGGTTTTTGCGTTAGCGCAATGCTGGGAGACAGTGGATGAAATGAAATGTAAGGATTGCTTGGAAAGAGCATCGCAGAGTATTCATGAATGTGTGCCTGGTGCAGAAGGGAAGTGTATGTATACTGGTTGTTTCATGAGGTATTCAACCACCAAATTCTTTAATGACGATGAAGAAAAAGTTTCGTCGAAATTTGGGTTGATAATAGCAGGCATTTTATCAGCAATTGGATTAATCTTCCTTATTTCACTTGGTGTACTTCTAAGCTGGCAAGGAGCAGTAAAAAGCAAAACAAaaaacaacaaaaaacgTAGGATGCCTAGTTTTTCCTCTGCAACTGGTTTGAATTTTAGGTATGAGTTCCTTGAGAAGGCCACCGATTGTTTTCATCCGTCGAGGAAGTTAGGCCAAGGTGGAGCTGGTTCTGTATTTAAAGGAACCCTCCCTTCAGGTAGAACTATTGCTGTTAAGAGATTGTTTTTTAATACAAGACAATGGGCAGATGGATTCTTCAATGAGGTCAATTTGATAAGTGGGATTGAACACAAGAATCTGGTGAAACTTATGGGATGTAGCATTGAAGGCCCTGAGAGCTTATTGGTTTATGAATATCTGCCCAACAAAAGTCTTGATCAAGTAATTTTTAAGAAGGCAGATGTGTATGCATTAGGTGTGGTTATTATTGAAATTGTATGTGGTCAGAAGAATAGCATTTTTACCGAAGGATCATCTTCAATTCTCCACCTTGTGTGGAAGAATTACAATGCAAACAGTATTACAAGATCTGTTGATCCTGCTCTAAATGGgaatttttgtgaagaagaagcaTCAATTGCACTCCGAATTGGGCTTCTGTGTGTACAATCTTCTGTTTCGCAAAGACCATTGATGGCTGAAGTGCTTCAGATGCTAACCAACCATGATTACATTATTCCCTCCCCAAGGCACCAACCATTCCTTAATTCTAGTGTGATGAGTCCCGATGATCGCACCAAAACTTCCACCATGAGCTTTTTGTCCCCACTAAATGTGCATATAGGTGTAGGTGAGAACTCTTCCTCCCAAAGCCATAGGTCGTCAACCTCAAGTGAGCATTCAACGTCTGAGAACTCTTTTTCTGGTACAACTATGGTAACTCCTGAGCCAAGGTAG 1623 0.4097 MCGSSQYHDGQNLIQIFLSLMDILANKVNEKGWAAESIYGTSFAMYALGQCHHDLDSKQCVACFTKARESLPKCLPSLSGRIYLDGCFLRYDNYQFFNESKDETHDKCDCQGPPKYVQDNPSFKLGFEKQVMSVVSNVTKDAAKHKFAVGRKRGGVEKVFALAQCWETVDEMKCKDCLERASQSIHECVPGAEGKCMYTGCFMRYSTTKFFNDDEEKVSSKFGLIIAGILSAIGLIFLISLGVLLSWQGAVKSKTKNNKKRRMPSFSSATGLNFRYEFLEKATDCFHPSRKLGQGGAGSVFKGTLPSGRTIAVKRLFFNTRQWADGFFNEVNLISGIEHKNLVKLMGCSIEGPESLLVYEYLPNKSLDQVIFKKADVYALGVVIIEIVCGQKNSIFTEGSSSILHLVWKNYNANSITRSVDPALNGNFCEEEASIALRIGLLCVQSSVSQRPLMAEVLQMLTNHDYIIPSPRHQPFLNSSVMSPDDRTKTSTMSFLSPLNVHIGVGENSSSQSHRSSTSSEHSTSENSFSGTTMVTPEPR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0773 540 ProSiteProfiles Protein kinase domain profile. 286 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0773 540 Gene3D Phosphorylase Kinase; domain 1 246 361 - -
Sto12g0773 540 SUPERFAMILY Protein kinase-like (PK-like) 273 491 IPR011009 -
Sto12g0773 540 ProSiteProfiles Gnk2-homologous domain profile. 1 96 IPR002902 -
Sto12g0773 540 Pfam Protein tyrosine and serine/threonine kinase 289 373 IPR001245 GO:0004672|GO:0006468
Sto12g0773 540 Gene3D - 1 96 IPR038408 -
Sto12g0773 540 Gene3D - 115 210 IPR038408 -
Sto12g0773 540 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 1 373 511 - -
Sto12g0773 540 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 1 1 374 - -
Sto12g0773 540 MobiDBLite consensus disorder prediction 506 540 - -
Sto12g0773 540 ProSiteProfiles Gnk2-homologous domain profile. 104 210 IPR002902 -
Sto12g0773 540 Pfam Salt stress response/antifungal 125 207 IPR002902 -
Sto12g0773 540 Pfam Salt stress response/antifungal 17 94 IPR002902 -
Sto12g0773 540 Gene3D Transferase(Phosphotransferase) domain 1 370 466 - -
Sto12g0773 540 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 374 - -
Sto12g0773 540 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 373 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0773 Sto-Chr12 4839757 4842858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0773 3 375 Receptor kinase-like Gene Family AT5G40380 44.947 1.37e-99 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto12g0773 PK_Tyr_Ser-Thr 1.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0773 - - zju:107418385 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0773 12 4839757 4842858 Sto12g0773 12 4839757 4842858 ECH