Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0765 ATGAGCTCGATAAACAGCATGGATATCAAAATAGGAGGGAAAATAGAGAAGGTGAATGGGAAAGAACTGAGTTACAGTGAATTTGTAGAGAGGTACATGGAGAAGAACCAGCCGGTGGTGCTCACAGGAATAATGGAAGATTGGAGGGCTTCCGGAGATTGGGTCACCTGTAATGGGCAACCCAACCTTCAATTTTTCTCTTCACATTTTGCGAGTTCTAAAGTTCAGGTTGCAGATTGTGGCACTAGAGAATTCACGGATCAGAAGAGGGAGGAGATGTGTGTCTCAGATTTTATCAGGCGTTGGCTAGAGGGTTCTTCAGTACAGTGTAATACTGAAAATCATACTAGTAACGGTCAGTGCTCTGTGCCGTATTTGAAGGATTGGCACTTTGTAAAGGAATGCCCAGATTACTTAGCATACATCACTCCAGTGTTCTTTCGTGATGATTGGCTCAACCTCTATCTTGACAACTACAGAATGCATATTGATCCTGACACTTCCCAgcaaaataatgaaatatgtTGCTCTGACTATCGTTTTGTTTACATGGGGGTGAAAGGATCTTGGACTCCTCTGCATGCTGATGTTTTCAGATCTTATAGTTGGTCATCAAATGTCTGTGGGAGGAAAAGATGGCTTTTTCTTGCTCCTTCTCAGAGTCATCTCATATTTGACAGGAACGTGAAAAACTGTGTGTATAATATATTTGATGAAGTATGTGAATCAACATTTCCTGGTTTTAGAAAGGCTATCTGGTTAGAATGCACACAAGAAGCAGgtgaaattatttttgttcCCAGCGGATGGTATCATCAAGTTCATAACCTGGAGGATACTATATCTATAAATCACAACTGGTTCAATGCCTTTAACCTTTCTTGGGTGTGGAATTTACTCTTGAGGGACTACAATGAGGCAAAGGAATACATAGAAGACATCAAAGATATATGTGATGATTTTGAAGGTCTCTGCCAGCGCAATCTCTTCGCTAACACAGGGATGAACTTTTATGACTTCTTTACTTTCATAACATGCTTCACCCTGGCCAACTTAAACTTGCTTTGCTTTCTAAGTAGAAAATATGGAAGTCCCCCTGGATGTTCATCAACAATCACGCAGCATCTATTTTTGAATCTTGGATCTATAAGGAAGGTTGCATCGGAGATGAAACACATGCATGCTCTGGAAGGAAATCGTGATTGCTCCCTAGACGTTATCAAAACAATAGAAGATCCTAGGTTTCCCAAGTTGTGTGTGGGTTTGGGAAGAACATATGTGATAATACATGAGCAACCTAATTTGGCTTCTGACTTTGAGAAAGCTGCAGTTGATTATCTGATGGGCCTTAATGTTTTGAAAGAATACACTTCTTCTCAGATCTACACACCTGAAGATCTCATCAAACTTATAGACAATGCTGTTGCAGAACTTGGTGACAATTACACTATGGAGCTGTCTGGGATTCATGTCGCATTACTGGAGGACTTCAGGGATCCCACCGTCGTCTCCATTCATGGTTATAGACTTATAGTGGCCAGAATGCAGATTTCTGTGGCAGTAGTGGTAGGGCTGTTCTCATCTTGTTCTGTGAAAAGGTTGGTTGGTGGTACACCAGGTAAGGCTTCTGCACATGGTTCAATATTGTTTGGTGAGGGAGTAGGTGAGGATTCTAGGATTTGTGGGACTTGGCTTTTTAGCTTGAACAAGTGTGTCCAAGTGGCTCTGCTATGGTCATCAACAATGTTTATTCACAGAgatcaaattaaaatcaaaagtAGGAATCAACAAGGTATCAACCAGAGACAGATTAGGATGCAAAACAACTTGGCCCTTAGTGTTTACAAGCTTAGTGGAGGAATCTGGTATTTTCCCATCTCTGATTTGATAAGCTGTGCCACCATAGAGGCCAGTTCATTCTGCTTATCCCCTTCATCTTTCTCAGATTCCAAGTTCACACCACTGCTAGATCCTGCCATATTCACAGCAGCTCTCTTACCACCCTTCTTTGTCTCCTTCAAGTCTTTAAACCAATCCGGCTGCAGGTTGGTTGAGGCAGAAGACGATCGATCTCATCCCATGCTCTACGCAACTTCCCATATTCGCTTTCCATATCTTCGTTCTAGTTCATCCCAGATTTTCTTGGCAGAAACACAGAATATGAGTGTATCTGCAATTTGCTTATCGATGGAATTAGTAATCCATGCTTTCACCATGGAGTCCACCTTTTTCCACCGTCGGTGTTGTGTACCATCTGTAGGTTCCAGTAAGGTTCCATCGATGAATCCCATCTTCTCTTTAGCCTCAAGAGAATTTTTGATGGCCAAGCTCCATGTGTGCTTCCTCCATTTGAACCAGTGTTACTGCTTGAATCACTCATTTTCGTCTAAAACTGAGAAAATGGCAGAGATGCAGAACGGAAGAAGCTTGCAGATAGAGAAGGACAAGATACTGGAATTTTGTACTCAGCAATTAacctgctctgataccatgataaAAGCAATCAGAGTAAGAACAACTGAGAAATTCATGCATTGCTCATTGATGCTCAGTACTATATATACAATTGAGGAGAGCTAA 2580 0.4058 MSSINSMDIKIGGKIEKVNGKELSYSEFVERYMEKNQPVVLTGIMEDWRASGDWVTCNGQPNLQFFSSHFASSKVQVADCGTREFTDQKREEMCVSDFIRRWLEGSSVQCNTENHTSNGQCSVPYLKDWHFVKECPDYLAYITPVFFRDDWLNLYLDNYRMHIDPDTSQQNNEICCSDYRFVYMGVKGSWTPLHADVFRSYSWSSNVCGRKRWLFLAPSQSHLIFDRNVKNCVYNIFDEVCESTFPGFRKAIWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAFNLSWVWNLLLRDYNEAKEYIEDIKDICDDFEGLCQRNLFANTGMNFYDFFTFITCFTLANLNLLCFLSRKYGSPPGCSSTITQHLFLNLGSIRKVASEMKHMHALEGNRDCSLDVIKTIEDPRFPKLCVGLGRTYVIIHEQPNLASDFEKAAVDYLMGLNVLKEYTSSQIYTPEDLIKLIDNAVAELGDNYTMELSGIHVALLEDFRDPTVVSIHGYRLIVARMQISVAVVVGLFSSCSVKRLVGGTPGKASAHGSILFGEGVGEDSRICGTWLFSLNKCVQVALLWSSTMFIHRDQIKIKSRNQQGINQRQIRMQNNLALSVYKLSGGIWYFPISDLISCATIEASSFCLSPSSFSDSKFTPLLDPAIFTAALLPPFFVSFKSLNQSGCRLVEAEDDRSHPMLYATSHIRFPYLRSSSSQIFLAETQNMSVSAICLSMELVIHAFTMESTFFHRRCCVPSVGSSKVPSMNPIFSLASREFLMAKLHVCFLHLNQCYCLNHSFSSKTEKMAEMQNGRSLQIEKDKILEFCTQQLTCSDTMIKAIRVRTTEKFMHCSLMLSTIYTIEES 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0765 859 Pfam Cupin-like domain 27 290 IPR041667 -
Sto12g0765 859 SUPERFAMILY Clavaminate synthase-like 10 316 - -
Sto12g0765 859 Gene3D Cupin 2 288 - -
Sto12g0765 859 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 12 478 - -
Sto12g0765 859 SMART cupin_9 124 304 IPR003347 -
Sto12g0765 859 ProSiteProfiles JmjC domain profile. 131 304 IPR003347 -
Sto12g0765 859 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE JMJD4 12 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0765 Sto-Chr12 4784264 4794432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0765 13 296 Glycosyltransferase AT1G78280 24.068 6.00e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Sto12g0765 Cupin_8 6.7e-23 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0765 - - gmx:100803814 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0765 12 4784264 4794432 Sto12g0765 12 4784264 4794432 ECH