Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0762 ATGCCTGAAAATCCATGGaccctcttcttcctctgctTTTCTCTCTCACTTCTCCACCATTCTTTTTTAGCTCATGCAGTAAACCAGCAAGGAGAAGCTCTTCTTTCATGGAAGATAACCCTGAAGGGGTCCCTGGAGGTGCTGAGTGATTGGGATCCAAATGACATCACACCATGTGGCTGGTTTGGAGTTAACTGTAACTCCCACAACCAAGTTACGAAATTGGATCTCAGGTATGTGGATTTAGTTGGAACGCTTCCTTCTAATTTCACCTCATTGCTTTCCCTGAACCAGCTGGTCCTAACCGGAACCAACCTCACTGGTTCAATCCCAAAAGAAATAGGCACACTTGTTGACCTCACCTACTTGGACTTGAGTGACAATGCCTTGACTGGTGAAATCCCAACTGAGCTTTGCTTCTTACCCAAACTTGAGCAACTCCATTTGAACTCAAACCAGCTTGTGGGTTCGATTCCAAATGCAATAGGAAACCTCACAAGAACCATTGGAAGCCTGTGGAAGCTGCAAGTGATCAGAGCTGGTGGAAACAAGAATCTTGAAGGCTCTTTGCCACAAGAAATTGGGAATTGTACGAATTTGATCATGTTGGGTCTGGCTGAAACAAGTCTATCAGGTTTTCTTCCTCCATCTCTTGGCCTTCTCAAGAAGCTTGACACTATAGCAATTTACACTTCTCTCATCTCTGGCCAAATCCCTCCCGAGCTCGGTGATTGCACACGGCTTAAGAATATTTATCTGTATGAGAACTCTCTCACAGGATCCATACCAAGTAAATTGGGAAATCTTAGGAACCTCCAGAATCTTCTACTATGGCAGAACAATTTCGTTGGCACCATCCCACCAGAGATTGGAAATTGCTACCAGCTTTCTGTCATTGATATCTCAATGAATTCACTGAGTGGAAGCATTCCCAAAAGTTTTGGGAATTTGACGTCGCTAGAGGAACTTCAGCTTAGTGTCAATCAGATTTCTGGTGAGATTCCAGCGGAATTAGGAAGGTGTGAGCAACTCACTCACGTTGAGCTAGACAATAATCAGATTACGGGTACGATACCTTCTGAATTGGGGAACCTTAGGAATCTGACTTTGTTGTTCCTATGGCATAACAAGCTCGAAGGAACTATTCCGTCTTCCCTTTCGAATTGTCAAAATTTGGAAGCCGTAGATCTATCGCAGAATGGATTGACGGGTTCCATACCCAAGGGGATATTCCAGCTCAAGAATTTGAATAAGCTCTTGCTACTCTCTAATAATCTCTCCGGGAATATACCACCTGAGATTGGAAATTGTACGTCTCTGATTCGATTCCGAGCGAGCAACAATAAGATCACAGGTAATATTCCACCACAGGTTGGGAATCTGAGGAATTTGAATTTCTTGGATCTTGGAAGCAACCGTATTACAGGAGTTATACCAGAGGAGATCTCAGGCAGCCGGAATCTCACGTTCTTGGACCTACATTCCAACTTGATCGCCGGAAACTTGCCGGCAAGCCTCAGCCAGCTCGTCTCGCTTCAATTTATTGACGTCTCCGATAACATGATCGAAGGTACACTCAGCCCTAGCCTCGGATCACTTGCCTCACTCACGAAACTCGTTCTCGGAAAGAACCATATCTCCGGGTCAATTCCGAGTGAACTCGGTTCTTGTACGAAGCTGCAATTGTTGGACCTCAGTAGTAATCAACTCTCCGGTAACCTTCCGGGTAGTATGGGTAACATTCCGGGGCTCGAAATTGCATTGAATCTCAGCTGTAATCAATTCTCCGGCGAGATCCCTCAGGAGTTTTCAGCCTTGAACAAACTCGGAATGTTAGACATATCGCACAACCAGCTCAGTGGTAGCCTTCAATATCTCGAGGACCTTCAAAATCTCGTGGTCCTCAATATCTCATACAACAAATTCTCAGGTCGCGTTCCAGACAAGCCTTTCTTCTCAAAGCTCCCTCTCAGTGTGCTCGAGGGGAACCCGTCACTCTGCTTCTCCGGCAACCAATGCGCCGGAGACGAGTCCAGAGGATCAGTGCGGCGGACAGAGGCGGCGCGTGTAGCCATGGTGGTCCTTCTATGTATCGCGTGCGTGCTCTTCTTGGCGGCGTTATACGTCGTCGTTGCAGCAAGAAGACAAGGGTTCCCAGAGAACGATATGGATATCGATGGTAGTGATAGGGACTTGGAGATGGGCCCACCTTGGGAGGTGACGCTGTATCAGAAGCTCGACTTGTCAATCTCTGACGTGGCAAAATGTCTGACAGCTGGCAACGTCATCGGGCGAGGACGATCCGGCGTCGTTTACAGGGTAAATCTCCCGTCGGGATTGGCCATCGCCGTGAAAAGGTACAGGTCATCGGAGAAATTCTCAGCCTCGGCATTCTCCTCGGAGATTGCCACGCTGGCAAGAATCCGGCACCGGAATATCGTGCGGTTATTGGGTTGGGCGGCGAACCGGAAAACGAAATTACTGTTGTATGATTATTTACCAAACGGTAATTTAGACACGCTCATCCACGAAGGGTGCACAGGATTGATCGAGTGGGAGACACGGTTCAAGATAGCATTAGGCTTGGCTGAGGGCTTGGCTTACTTACACCATGACTGCGTGCCTGCTATCTTGCACCGGGACGTGAAGGCGCTCAACATTTTGTTAGGAGACAGATATGAACCGTGTTTGGCAGACTTTGGATTTGCTAGATTGGTGGAAGATGATCATGGTCCGTTTTCTATGAACCCACAGTTCGCAGGTTCTTACGGCTACATTGCGCCGGAGTATGGATGCATGCTGAGAATCACAGAGAAGAGCGATGTGTACAGCTTCGGCGTAGTGGTGTTGGAGATAATAACAGGAAAGAGACCGGTGGACGCGTCATTTGCGGAGGAGGGGCAGCACGTGACGGAGTGGGTTCGAGAGAAGCTAAAGAGGAAGAATGATAAGGAGGCAATAGAGGTGTTGGATAGTAAGCTTCGAGGGCATCCAGACACACACATACAAGAGATGCTTCAAACGCTTGGGATCGCACTCTTGTGCACTAGCCAACGCGCAGAGGATCGCCCCACCATGAAAGACGTGGCAGCATTATTGAGAGAGATTAAACACGATCCTTCCCTCCCTCATGAGCCCCACaagAAAACGACGTCTCAACATTCGTCGTATTCCTCCTCTTCGGTTACTCCTGCTCATTTGTTGCTGCTTCACTCCTCTTCTCATTCCTCTAATTCCCTTGCTTATTCTAATTCTTCTTGA 3261 0.4738 MPENPWTLFFLCFSLSLLHHSFLAHAVNQQGEALLSWKITLKGSLEVLSDWDPNDITPCGWFGVNCNSHNQVTKLDLRYVDLVGTLPSNFTSLLSLNQLVLTGTNLTGSIPKEIGTLVDLTYLDLSDNALTGEIPTELCFLPKLEQLHLNSNQLVGSIPNAIGNLTRTIGSLWKLQVIRAGGNKNLEGSLPQEIGNCTNLIMLGLAETSLSGFLPPSLGLLKKLDTIAIYTSLISGQIPPELGDCTRLKNIYLYENSLTGSIPSKLGNLRNLQNLLLWQNNFVGTIPPEIGNCYQLSVIDISMNSLSGSIPKSFGNLTSLEELQLSVNQISGEIPAELGRCEQLTHVELDNNQITGTIPSELGNLRNLTLLFLWHNKLEGTIPSSLSNCQNLEAVDLSQNGLTGSIPKGIFQLKNLNKLLLLSNNLSGNIPPEIGNCTSLIRFRASNNKITGNIPPQVGNLRNLNFLDLGSNRITGVIPEEISGSRNLTFLDLHSNLIAGNLPASLSQLVSLQFIDVSDNMIEGTLSPSLGSLASLTKLVLGKNHISGSIPSELGSCTKLQLLDLSSNQLSGNLPGSMGNIPGLEIALNLSCNQFSGEIPQEFSALNKLGMLDISHNQLSGSLQYLEDLQNLVVLNISYNKFSGRVPDKPFFSKLPLSVLEGNPSLCFSGNQCAGDESRGSVRRTEAARVAMVVLLCIACVLFLAALYVVVAARRQGFPENDMDIDGSDRDLEMGPPWEVTLYQKLDLSISDVAKCLTAGNVIGRGRSGVVYRVNLPSGLAIAVKRYRSSEKFSASAFSSEIATLARIRHRNIVRLLGWAANRKTKLLLYDYLPNGNLDTLIHEGCTGLIEWETRFKIALGLAEGLAYLHHDCVPAILHRDVKALNILLGDRYEPCLADFGFARLVEDDHGPFSMNPQFAGSYGYIAPEYGCMLRITEKSDVYSFGVVVLEIITGKRPVDASFAEEGQHVTEWVREKLKRKNDKEAIEVLDSKLRGHPDTHIQEMLQTLGIALLCTSQRAEDRPTMKDVAALLREIKHDPSLPHEPHKKTTSQHSSYSSSSVTPAHLLLLHSSSHSSNSLAYSNSS 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0762 1086 SUPERFAMILY L domain-like 55 308 - -
Sto12g0762 1086 SMART serkin_6 757 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0762 1086 MobiDBLite consensus disorder prediction 1038 1062 - -
Sto12g0762 1086 SMART LRR_typ_2 317 341 IPR003591 -
Sto12g0762 1086 SMART LRR_typ_2 606 629 IPR003591 -
Sto12g0762 1086 SMART LRR_typ_2 533 557 IPR003591 -
Sto12g0762 1086 SMART LRR_typ_2 117 139 IPR003591 -
Sto12g0762 1086 SMART LRR_typ_2 413 437 IPR003591 -
Sto12g0762 1086 SMART LRR_typ_2 365 389 IPR003591 -
Sto12g0762 1086 SMART LRR_typ_2 461 485 IPR003591 -
Sto12g0762 1086 SMART LRR_typ_2 269 293 IPR003591 -
Sto12g0762 1086 SMART LRR_typ_2 141 165 IPR003591 -
Sto12g0762 1086 ProSitePatterns Protein kinases ATP-binding region signature. 763 785 IPR017441 GO:0005524
Sto12g0762 1086 Gene3D Transferase(Phosphotransferase) domain 1 833 1059 - -
Sto12g0762 1086 Pfam Protein kinase domain 760 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0762 1086 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 1051 - -
Sto12g0762 1086 ProSiteProfiles Protein kinase domain profile. 757 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0762 1086 Pfam Leucine Rich repeat 120 133 IPR001611 GO:0005515
Sto12g0762 1086 SUPERFAMILY Protein kinase-like (PK-like) 745 1034 IPR011009 -
Sto12g0762 1086 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Sto12g0762 1086 SUPERFAMILY L domain-like 423 668 - -
Sto12g0762 1086 Gene3D Ribonuclease Inhibitor 26 166 IPR032675 -
Sto12g0762 1086 Gene3D Ribonuclease Inhibitor 406 500 IPR032675 -
Sto12g0762 1086 Gene3D Ribonuclease Inhibitor 312 405 IPR032675 -
Sto12g0762 1086 SUPERFAMILY L domain-like 233 496 - -
Sto12g0762 1086 PANTHER OS01G0170300 PROTEIN 8 1051 - -
Sto12g0762 1086 Gene3D Ribonuclease Inhibitor 501 586 IPR032675 -
Sto12g0762 1086 Gene3D Ribonuclease Inhibitor 587 674 IPR032675 -
Sto12g0762 1086 Pfam Leucine rich repeat 366 426 IPR001611 GO:0005515
Sto12g0762 1086 Pfam Leucine rich repeat 270 330 IPR001611 GO:0005515
Sto12g0762 1086 Pfam Leucine rich repeat 462 522 IPR001611 GO:0005515
Sto12g0762 1086 ProSitePatterns Serine/Threonine protein kinases active-site signature. 877 889 IPR008271 GO:0004672|GO:0006468
Sto12g0762 1086 Gene3D Phosphorylase Kinase; domain 1 741 832 - -
Sto12g0762 1086 Gene3D Ribonuclease Inhibitor 167 311 IPR032675 -
Sto12g0762 1086 SMART LRR_sd22_2 117 149 - -
Sto12g0762 1086 SMART LRR_sd22_2 606 631 - -
Sto12g0762 1086 SMART LRR_sd22_2 365 394 - -
Sto12g0762 1086 SMART LRR_sd22_2 461 484 - -
Sto12g0762 1086 SMART LRR_sd22_2 557 576 - -
Sto12g0762 1086 SMART LRR_sd22_2 509 535 - -
Sto12g0762 1086 SMART LRR_sd22_2 245 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0762 Sto-Chr12 4775172 4779266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0762 26 1086 Receptor kinase-like Gene Family AT5G56040 52.530 0.0 1078
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto12g0762 Pkinase 7.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0762 - - gmx:100778064 1606.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0762 12 4775172 4779266 Sto12g0762 12 4775172 4779266 ECH