Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0745 ATGGAATTAAAACAAACAAGTCAAGAAAGAACCGTTATCAAGTTCCTCTGTAGCTATGGCGGCAAGATTCTTCCTCGAGGCACCGACGGCATGCTCCGTTACGTCGGCGGCCACACCAGAGTCCTCGCCGTTCATCCTTCTATTTCCTTTTCAGAGCTCATGGTGAAGCTTGGAGAGTTGTGTGGTTCGTCTGTGACGTTGAAGTGTCCGTTGCCAAACGGAGACTTAGAGACCTTGATTTCCGTTACCAGCGACGAAGATTTGGCGAATATAATTGAGATATATGATGAAGCTTCGTCGTCGTTGGCTCATCCGTTGAAGACCAGAGCCATTCTTTCGCCGCCCATGTCACTCAAGAAAGTATCTCCTCCTCCGTCATCTGCATCTAGCGCCAACCAATCGCCTTCCAGATCTCCCCACAAGTCCTCCGTCGAATCCTTGCCATATTCCATGGCCTATCGCTGTATCTGTCGTAACTGCTCTCCGTCGGTTCGATATCCAATCGCTGTCCGGTACGGGAGCCCTAGGTTTTTGTACGGCGGATCTCGCTTCAACAATTACTGCCACTGA 570 0.5018 MELKQTSQERTVIKFLCSYGGKILPRGTDGMLRYVGGHTRVLAVHPSISFSELMVKLGELCGSSVTLKCPLPNGDLETLISVTSDEDLANIIEIYDEASSSLAHPLKTRAILSPPMSLKKVSPPPSSASSANQSPSRSPHKSSVESLPYSMAYRCICRNCSPSVRYPIAVRYGSPRFLYGGSRFNNYCH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0745 189 MobiDBLite consensus disorder prediction 122 144 - -
Sto12g0745 189 PANTHER OS05G0427100 PROTEIN-RELATED 10 189 - -
Sto12g0745 189 MobiDBLite consensus disorder prediction 116 144 - -
Sto12g0745 189 SUPERFAMILY CAD & PB1 domains 29 102 - -
Sto12g0745 189 Pfam PB1 domain 32 99 IPR000270 GO:0005515
Sto12g0745 189 PANTHER PB1 DOMAIN PROTEIN 10 189 - -
Sto12g0745 189 CDD PB1_UP2 16 103 - -
Sto12g0745 189 Gene3D - 33 107 - -
Sto12g0745 189 SMART PB1_new 27 115 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0745 Sto-Chr12 4647630 4648299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0745 7 97 MAP Kinase Kinase Kinase AT3G46920 46.154 2.85e-24 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0745 - - gsj:114393520 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1371 3 9947077 9947742 Sto12g0745 12 4647630 4648299 CCT
Sto12g0745 12 4647630 4648299 Sto12g0745 12 4647630 4648299 ECH