Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0739 ATGGAATCTGATGGTAGGTTCTGCTCAGTTGATGAGTTCAGATTGGACGCGAAATGGCTAATTGATCCTAAGCATCTCTTTGTTGGTCCAAGGATTGGAGAGGGAGCTCATGCCAAAGTCTATGAGGGAAAATATAAAAACCAGACCGTTGCCATTAAAATTGTACATAAAGGAGAAACTACAGAAGAGATCGCCAAGAGAGAAGCCCGATTTGCGAGGGAGGTGGCAATGCTGTCCAGAGTTCAACACAAGAACTTAGTGAAGTTTATTGGTGCCTGCAAGGAGCCTGTAATGGTGATAGTCACTGAGCTCTTATTGGGAGGAACTTTGCGTAAGTATTTGCTCAACATGCGCCCAAAATGCTTGGACATACATGTTGCCATCGGTTTTGCACTTGATATTGCTCGTTCTATGGAATGCCTGCATTCCCATGGTATTATCCACCGTGACCTCAAACCTGAAAACTTACTCTTGACTGAAGACCAGAAAACCGTCAAGCTAGCAGATTTTGGCTTAGCAAGAGAAGAGTCGTTAACAGAGATGATGACTGCTGAAACAGGAACTTACCGTTGGATGGCTCCAGAGTTGTACAGCACTGTCACCCTAAGGCACGGAGAGAAGAAGCATTACAACCACAAGGTGGATGCTTATAGCTTTGCAATCGTTTTGTGGGAGCTCATACACAACAGATTACCATTTGAAGGCATGTCAAATCTCCAGGCAGCATATGCAGCAGCCTTTAAAAATGTGAGACCCAGTGCAGAGAATGTCCCTGAGGAATTGGCTGTAATTCTTACTTCATGCTGGCAGGAGGACCCCAATTCCCGGCCAAACTTCACACAAATAATCCAGATGCTCCTACATTATCTTTACACCATATCACCTCCTGAACCAATGATTCCTTCAAGAATATTCACTTCTGAGAACACTGTCCTGCCACCAGAGTCCCCTGGTACACGCTCTCTGATGGCGAAACGCGACGACACAGGGGACACACCCAGGACAAAGGAGGAAACTCAGCCTGCAGCTCAATCTATCATAATGTGCTTCAAACTAGCATTGTTACTGAACAATGCATTTAGTGTTTCTGGGTGTTCAATTGTAACACGTGAGGTGGTAAAATTGTACTATAATCTCTCTATCGTGACTAGGAGCAATTTTTATGACATGAATTCTGTTCCTGCCATTGCTAGCTGGCCATGTTGGATATTGCAAGAGGAACTAGGATATATATTGAGTACAGGATAA 1248 0.4423 MESDGRFCSVDEFRLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETTEEIAKREARFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPKCLDIHVAIGFALDIARSMECLHSHGIIHRDLKPENLLLTEDQKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRHGEKKHYNHKVDAYSFAIVLWELIHNRLPFEGMSNLQAAYAAAFKNVRPSAENVPEELAVILTSCWQEDPNSRPNFTQIIQMLLHYLYTISPPEPMIPSRIFTSENTVLPPESPGTRSLMAKRDDTGDTPRTKEETQPAAQSIIMCFKLALLLNNAFSVSGCSIVTREVVKLYYNLSIVTRSNFYDMNSVPAIASWPCWILQEELGYILSTG 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0739 415 SUPERFAMILY Protein kinase-like (PK-like) 18 314 IPR011009 -
Sto12g0739 415 MobiDBLite consensus disorder prediction 313 340 - -
Sto12g0739 415 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 328 - -
Sto12g0739 415 Pfam Protein tyrosine and serine/threonine kinase 30 286 IPR001245 GO:0004672|GO:0006468
Sto12g0739 415 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672|GO:0006468
Sto12g0739 415 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672|GO:0006468
Sto12g0739 415 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672|GO:0006468
Sto12g0739 415 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Sto12g0739 415 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0739 415 CDD STKc_MAP3K-like 32 286 - -
Sto12g0739 415 MobiDBLite consensus disorder prediction 321 335 - -
Sto12g0739 415 Gene3D Transferase(Phosphotransferase) domain 1 107 295 - -
Sto12g0739 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Sto12g0739 415 PANTHER SERINE-THREONINE PROTEIN KINASE 1 328 - -
Sto12g0739 415 ProSiteProfiles Protein kinase domain profile. 26 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0739 415 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Sto12g0739 415 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0739 Sto-Chr12 4624151 4627042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0739 9 350 MAP Kinase Kinase Kinase AT5G50180 79.240 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto12g0739 PK_Tyr_Ser-Thr 2.1e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0739 - - gmx:100796593 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1365 3 9909275 9915366 Sto12g0739 12 4624151 4627042 ECH
Sto12g0739 12 4624151 4627042 Sto12g0739 12 4624151 4627042 ECH