Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0732 ATGCCGCAGGATTCGTCCGAACAAGACCTAGACAATTCTGACTCTGACTTTGTGGAGATTGATCCCACCCGTCGATATGGTCGGTACAAGGAAGTTTTGGGGAAGGGGGCTTTCAAGAAAGTATATCGAGCCTTCGATGAGTTGGAAGGAATTGAAGTTGCTTGGAATCAGGTTAAAGTGGTGGAACGGTTGCGTAATTCCGAGGAATTGGAACGCCTATATTCAGAAGTTCATTTGCTGAAGACCTTGaagcataaaaatataattaaattttataattcatgGGTTGACACGGAGCATGGCACCATCAATTTCATTACTGAAATTTTTACTTCAGGAACATTACGCCAATACAGGAAGAAACATAAGCGTGTTGATTTGAAAGCTTTAAAGAAATGGTCGAGGCAGATTTTGGACGGCCTTTTCTATCTTCACAGTCATGATCCACCTATTATTCATCGAGACCTAAAGTGTGACAACATCTTTGTCAATGGAAATCATGGCGAGGTGAAAATTGGTGACTTAGGATTGGCAGCCATTCTTCAGCAAGCCAATTCAGCTCACAGTGTCAttgGTACTCCAGAGTTTATGGCCCCAGAGCTCTATGAAGAGGAATACAATGAGCTTGTCGACATTTATGCTTTTGGCATGTGCTTGTTAGAATTGGTTACTGTTGAGTACCCATACGCTGAATGTGCAAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATAAAGCCAGCATCATTGGCAAAAGTGGCTGATCCTGGAGTAAAAGCATTTATTGAAAAGTGTATTGCAAATGTATCTGTACGTTTGCCTGCAAAGGATCTCTTAATGGATTCCTTTCTTCATTTAGACGAAGATAGTGAAAGTATAGGACGGAGTTGCGGCCATCATGCCATTGGTATAAGTACTGAGGATAATTCTACAGAGACTAGTAGGGAATTTACAGTGGAAGGTCAAAGGAGAGACGTTAATACAATATTTCTGAAACTGAAAGTGGATTTCTCAgGTCTTATTCACACTATCCACTTTCCTTTTGATATTGAGACCGACACTGCAGTTGCTGTTGCTAGCGAAATGGTTGAGGAGCTGGAACTCACTGATCAAGATGTTACAACTATTGCTGAGATGATTGAATCAGAAATTCGATGCCACTTCCCCATCTGGAATCCCTGTGAAACTCCTCTCCATAGTGTTGGTGAAGAGTTGGCAGTTTCAGGTAGCTGTGCCTCTGAAAATGGAGGTGAGACATCTCCTGTGGGTAATGCTTCTTCTACTTTTACTGGTAGTCTTGCATTAGAAACATTACCTTCTGGTCGTAAGTTTTGGTCTGACTCACCCAAGGCAGTTGTTAGAAACTCTCCATTAAGGCCCGGTGCTTCAAACTTGTCCTGTAAAGTGGATATGAGGAGCACTAAGGAAGGTAACTTGGCTGAAAATGGTTCTACGCCAGTTCATCAGCAGGCTAACAACTTAATGGATGATGTTGATTGTAGTTCAGGGAAGAAATCTAGTGGGATTATTAATTCCCATTCCACTTCCACCCTGAGAGGTCTTGCATCTGAGGATTTAAAAGCAATCGAGGGAGGATCTCCTCTGGAAGAAAAATCTAGAAAGCTACAAGATACCGAATTAGAAAATGTCAACTTAATTGCCACAAAACTGGAGAATTTGTTGGTAAGACAGCAAGAAGAGTTAGTGAAACTAAAGAAGAAGCATGAATTAGCTGTCTCAGATTTTCTGAAGAAGCTTCCTTCTGATGTACGCCATCATGTTTTAAATATACGTGACCTGGAGATACCTGACAGTGGAGATGTAGAAACATGA 1836 0.4085 MPQDSSEQDLDNSDSDFVEIDPTRRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVVERLRNSEELERLYSEVHLLKTLKHKNIIKFYNSWVDTEHGTINFITEIFTSGTLRQYRKKHKRVDLKALKKWSRQILDGLFYLHSHDPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYAECANAAQIYKKVTSGIKPASLAKVADPGVKAFIEKCIANVSVRLPAKDLLMDSFLHLDEDSESIGRSCGHHAIGISTEDNSTETSREFTVEGQRRDVNTIFLKLKVDFSGLIHTIHFPFDIETDTAVAVASEMVEELELTDQDVTTIAEMIESEIRCHFPIWNPCETPLHSVGEELAVSGSCASENGGETSPVGNASSTFTGSLALETLPSGRKFWSDSPKAVVRNSPLRPGASNLSCKVDMRSTKEGNLAENGSTPVHQQANNLMDDVDCSSGKKSSGIINSHSTSTLRGLASEDLKAIEGGSPLEEKSRKLQDTELENVNLIATKLENLLVRQQEELVKLKKKHELAVSDFLKKLPSDVRHHVLNIRDLEIPDSGDVET 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0732 611 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Sto12g0732 611 Gene3D - 342 388 - -
Sto12g0732 611 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 6 605 - -
Sto12g0732 611 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Sto12g0732 611 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 344 385 IPR024678 GO:0004674|GO:0005524
Sto12g0732 611 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0732 611 Coils Coil 536 575 - -
Sto12g0732 611 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0732 611 SUPERFAMILY Protein kinase-like (PK-like) 20 285 IPR011009 -
Sto12g0732 611 CDD STKc_WNK 25 285 - -
Sto12g0732 611 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 605 - -
Sto12g0732 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Sto12g0732 611 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0732 Sto-Chr12 4589756 4592814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0732 15 392 MAP Kinase Kinase Kinase AT3G22420 52.283 1.83e-152 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sto12g0732 Pkinase 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0732 K08867 - twl:120003842 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0732 12 4589756 4592814 Sto12g0732 12 4589756 4592814 ECH