Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0712 ATGCCTCTCTCCGCTCCAAAATCCTCCCTTTTACtactctcttctttcttcttcctcctctcttcCACCCACGCCACAACAGATCTCCACCCTTCAGATTCCAAAGCTTTCTTCACTCTCCACAAGGACTTGGGAGTCAACGGTCAACTCACCACCCACCCATGTAACACCGACGGCGTCTTCTGCGAGAGGAGGCTCTCCAACAACGAGACCTATGCTCTTAGAATCACCAGAATCATCTTCTCCTCCAACAACCTTAATGGGGTTTTGTCTCCATCCTTTGGGCGTCTCTCTGAGCTCAAGGAGCTTTCTCTGCCACACAACCAACTTGTTGACCAAATCCCAACCCAGATTGCTGATTGCCGGAAACTCGAAATTCTCGACCTCTCAAACAACCGCTTCTCCGGCGAAGTCCCGTTGGAGTTGTCCTCCCTCATTCGCCTTCGAATCATTGACATTTCCTCCAACAAATTCTCTGGGAATTTGAATTTCTTGAAGTATTTCCCCAACCTGGAGCGTCTCTCTGTGGCCGACAATCTCTTCACAGGGAGAGTCCCAATATCCATACGTTCATTTCGCAATCTCCAGCACTTCAACTTCTCTGAAAATCGTTTCCTTGAAGTTCCTGGACCAATCATGATCAAGTTTGGTTCACGCTCAGCCTCAGATGTCCCCAAAAGGTACATGCTTGCTGAGAATTCAGCCACAAGGAGTAACAGAACTTCTTCAGCACCAGCTCCAAAATCCAGCAGGGGAACAGCACATCACCATCACAAGTCAACCAAGAAGAAACTGGGTGGGTGGATTCTGGGATTCGTAGCTGGAGCACTGGCTGGTACCTTATCTGGGTTGCTATTTTCCCTGCTCTTCAAGTTGGCCGTAGCTGTGATTAAAGGAGGAGGGAAGGGCTCAGGCCCTGCAATTTACAGTCCTTTGATTAAGAACGCAGACGATTTGGCTTTCTTGGAGAAAGAAGATGGACTTAATTCATTAGAACTCATAGGAAGGGGAGGCTGTGGAGAAGTTTACAAGGCTGAATTACCAAGAAGCAATGGAAAATTCATTGCTATTAAGAAGATCCTTCAACCTCCAATGGACGCAGCAGACATTGCTGAGGATGATAGCAAGCTTCTGCACAAAAAAATGAGGCAGATTCGATCAGAGATTAAGACAGTAGGTGAAATTCGACACCGCAACCTTCTACCCCTACTAGCACATGTGTCTAGGCCTGATTGCCACTACCTTGTGTATGAATACATGAAGAATGGAAGCTTACAAGATTTGCTGAATCAAGTTCAAGCTGGTGCAAGAGAGTTGGATTGGTTGGCACGCCACAAGATTGCACTTGGTATAGCTGCTGGCCTTGAATACCTTCACATTCACCATAGCTCTCGTATAATTCATAGAGATCTCAAGCCAGCAAATGTACTTCTTGATGATGATATGGAGGCGCGAATTGCAGATTTTGGGCTTGCAAAAGCAATGCCTgatgcacacacacacatcacATTCTCAGCTGTGGCGGGGACAGTGGGTTATATAGCACCAGAATATCACCAGACACTGAAGTTCACAgacaagtgtgacatatacagcTTTGGGGTTGTACTTGGTGCGTTGGTGATGGGGAAGATACCATCTGATCAGTTCTGGCAGGGCACGGAGGAGTTGAGTCTGGTGAAGTGGATGAGAAATGTGATGACTTCAGAAAATCCCACTCGAGCAATTGATCCAAAGCTGATGGGCAATGGATATGAGGAGCAAATGCTTCTGGTTCTCAAGATTGCGTGCTTTTGCACCCTGGATGATCCAAAGGAGAGGCCTAACAGTAAGGATATCAGATGCATGTTGCTCCAAATCAAACACTGA 1869 0.4505 MPLSAPKSSLLLLSSFFFLLSSTHATTDLHPSDSKAFFTLHKDLGVNGQLTTHPCNTDGVFCERRLSNNETYALRITRIIFSSNNLNGVLSPSFGRLSELKELSLPHNQLVDQIPTQIADCRKLEILDLSNNRFSGEVPLELSSLIRLRIIDISSNKFSGNLNFLKYFPNLERLSVADNLFTGRVPISIRSFRNLQHFNFSENRFLEVPGPIMIKFGSRSASDVPKRYMLAENSATRSNRTSSAPAPKSSRGTAHHHHKSTKKKLGGWILGFVAGALAGTLSGLLFSLLFKLAVAVIKGGGKGSGPAIYSPLIKNADDLAFLEKEDGLNSLELIGRGGCGEVYKAELPRSNGKFIAIKKILQPPMDAADIAEDDSKLLHKKMRQIRSEIKTVGEIRHRNLLPLLAHVSRPDCHYLVYEYMKNGSLQDLLNQVQAGARELDWLARHKIALGIAAGLEYLHIHHSSRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAHTHITFSAVAGTVGYIAPEYHQTLKFTDKCDIYSFGVVLGALVMGKIPSDQFWQGTEELSLVKWMRNVMTSENPTRAIDPKLMGNGYEEQMLLVLKIACFCTLDDPKERPNSKDIRCMLLQIKH 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0712 622 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 10 622 - -
Sto12g0712 622 ProSiteProfiles Protein kinase domain profile. 328 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0712 622 MobiDBLite consensus disorder prediction 232 260 - -
Sto12g0712 622 SMART serkin_6 328 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0712 622 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 10 622 - -
Sto12g0712 622 MobiDBLite consensus disorder prediction 232 249 - -
Sto12g0712 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Sto12g0712 622 Gene3D Phosphorylase Kinase; domain 1 319 419 - -
Sto12g0712 622 Pfam Protein kinase domain 330 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0712 622 Gene3D Ribonuclease Inhibitor 30 236 IPR032675 -
Sto12g0712 622 Gene3D Transferase(Phosphotransferase) domain 1 420 621 - -
Sto12g0712 622 Pfam Leucine rich repeat 77 134 IPR001611 GO:0005515
Sto12g0712 622 SUPERFAMILY L domain-like 52 209 - -
Sto12g0712 622 SUPERFAMILY Protein kinase-like (PK-like) 322 618 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0712 Sto-Chr12 4509259 4511160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0712 2 622 Receptor kinase-like Gene Family AT2G31880 62.559 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Sto12g0712 Pkinase 7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0712 - - pop:7453813 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0712 12 4509259 4511160 Sto12g0712 12 4509259 4511160 ECH