Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0706 ATGGCCGTCAAAACCATCTCGCCCACTGATGATTTCTCCGCCGTTTCTCCCGTCGCCTCCGGCGGCGACTACCTTACCTACCGGGTATTGCCCGAACCCGATGTTTTTATTCACACTTCCGGTGGCGCGCGCATTCCCGCACACACAAGCATTTTGGCTTCAGTGTCGCCGGTTCTGGAGAATATGATAGATCAACCACGCAAGCATCGGAGCTCCGAGAGGATCATTCCAATCCACGGTGTGCCTTGCGAAGCCGTCACCGCTTTTGTCGGCTTCCTCTACTGTTCCAGGTGTACGGAGGAGCAGATGGAGATGTACGGGATGCATCTGCTCACATTGTCGCATGTGTATTCAGTGCCACAGCTGAAGCAGAGGTGCATCAAGGCGCTTGCCGAACGGTTAACGATTGAGAATGTGGTGGATATGCTCCAACTCGCGAGGCTCTGTAATGCTCCCGATCTATACATCAAGTGCATGAAATTGCTCACCAATCATTTCAAATCAGTGGAAGCAACAGAAGGCTGGAAATTCTTGCAGAGGTATGATCCATGGCTTGAGCTCGACATTCTCCGCTTCATGGATGAGGACGAATCGaggaagaagaaatcGAGGAGGCAGAGGGAGGAGCAGAGGTTGTACATCGAGCTGAGCGAGGCGATGGAGTGTTTGGAGCACATATGCACAGAAGGCTGCACGGACGTTGGGCCTTACGGTGTGGAGCTACGGAAAGAGAAGAAACCGTGTAGCAAATTCTCCACGTGTCGCGGCCTCCAGCTTTTAATTAAGCACTTTGCAACGTGCAATAAGAGGATGAACGGAGGGTGCTTACGCTGCAAGCGAATGTGGCAGCTCTTCAGACTGCACTCTTCCATTTGCCAACAAACCGATTCCTGCAAGGTTCCTCTTTGCAGGGAAATACAAATGAAAATGCAGCAgcaagagaaaaggaaagaagatcCAAGGTGGAAACTTCTAGAGAGGAAGGTGGCCTCTGCCAGAGCCTTGTCTGCTCTGTCTCTGCCAAAGAGGAAGAGAGATGAGGGAATTAGAGTGACCATGAACAATTACGGGATCAGAAGTTTCAATTTCAAATGA 1095 0.495 MAVKTISPTDDFSAVSPVASGGDYLTYRVLPEPDVFIHTSGGARIPAHTSILASVSPVLENMIDQPRKHRSSERIIPIHGVPCEAVTAFVGFLYCSRCTEEQMEMYGMHLLTLSHVYSVPQLKQRCIKALAERLTIENVVDMLQLARLCNAPDLYIKCMKLLTNHFKSVEATEGWKFLQRYDPWLELDILRFMDEDESRKKKSRRQREEQRLYIELSEAMECLEHICTEGCTDVGPYGVELRKEKKPCSKFSTCRGLQLLIKHFATCNKRMNGGCLRCKRMWQLFRLHSSICQQTDSCKVPLCREIQMKMQQQEKRKEDPRWKLLERKVASARALSALSLPKRKRDEGIRVTMNNYGIRSFNFK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0706 364 Gene3D TAZ domain 209 314 IPR035898 -
Sto12g0706 364 CDD BACK 135 178 - -
Sto12g0706 364 Pfam BTB/POZ domain 33 132 IPR000210 GO:0005515
Sto12g0706 364 SUPERFAMILY TAZ domain 208 308 IPR035898 -
Sto12g0706 364 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 24 362 - -
Sto12g0706 364 SMART BTB_4 33 134 IPR000210 GO:0005515
Sto12g0706 364 SMART TAZ_2 210 304 IPR000197 -
Sto12g0706 364 Pfam TAZ zinc finger 217 303 IPR000197 -
Sto12g0706 364 Gene3D Potassium Channel Kv1.1; Chain A 32 134 IPR011333 -
Sto12g0706 364 ProSiteProfiles BTB domain profile. 33 102 IPR000210 GO:0005515
Sto12g0706 364 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 24 362 IPR044513 -
Sto12g0706 364 SUPERFAMILY POZ domain 34 133 IPR011333 -
Sto12g0706 364 Gene3D - 135 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0706 Sto-Chr12 4473697 4476541 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Sto12g0706 BTB 3.5e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0706 - - cam:101496955 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0706 12 4473697 4476541 Sto12g0706 12 4473697 4476541 ECH