Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0695 ATGAAGTTCACAAAAATTGCTtcaattttcttcatctttatgACGATTTCTATTGAAATCGTCAAAGTTTCTTCGTCGTCGGCTCTCTTACATGAAAACCAGGTTTCCGAGGAATCTGCTGGTGGAAGACATAATAAACAGGAACAAGAGCATGCTCATGAAGTACACTGCTCTAGAGAAAGAAGTAGGGTAGCTTCAAAAATAATTGAGCagTATTTGATGCCATTTGTGGAACAAGAAAACTATCAGCTCTCAAGCAAGTGCAGACTTCATCCGGACAATAATATATTCAGGGATCAGGAAgagcataaaatatacatagatATAAATGAATGGCGGTGTGGATATTGTAAGAAAAGCTTCCGTGCTGAAAAATTTCTTGATCAGCATTTTGATAACAGACACTACAATCTTCTAAATGTAAGTCATGGTAAATGCTTGGCTGATTTATGCGGGGCATTGCATTGTGATGCTGTGATGAATACCAAGATCTCTAAAACCAAGTGTAATCCAGCAGCTGCTGGGAGAAATCGTCACCTATGCGAGAGTCTTGCCGATAGTTGTTTTCCTATTAATGGGGGTCCCTCAGCAAGCCGCCTACGtgAAGGAAAGAAGTATGCTCTATATGGCTGCCGGAGCACTGACCTTGGTGCTACTTCCTGTGTTTtatctttttgtttatttggcACAAagAGATATGAAGAGTCGAAGTCAAGAGCTTCGGCGCATTACAAAAGTGGGACAGAAAGCAAAACCATCATGATTGGTATTGTTCATGTCTTTCAATGA 789 0.3764 MKFTKIASIFFIFMTISIEIVKVSSSSALLHENQVSEESAGGRHNKQEQEHAHEVHCSRERSRVASKIIEQYLMPFVEQENYQLSSKCRLHPDNNIFRDQEEHKIYIDINEWRCGYCKKSFRAEKFLDQHFDNRHYNLLNVSHGKCLADLCGALHCDAVMNTKISKTKCNPAAAGRNRHLCESLADSCFPINGGPSASRLREGKKYALYGCRSTDLGATSCVLSFCLFGTKRYEESKSRASAHYKSGTESKTIMIGIVHVFQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0695 262 ProSitePatterns Zinc finger C2H2 type domain signature. 114 135 IPR013087 -
Sto12g0695 262 MobiDBLite consensus disorder prediction 34 56 - -
Sto12g0695 262 MobiDBLite consensus disorder prediction 37 56 - -
Sto12g0695 262 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 202 - -
Sto12g0695 262 PANTHER ZINC FINGER PROTEIN-RELATED 9 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0695 Sto-Chr12 4414062 4417059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0695 46 200 C2H2 Transcription Factor Family AT5G40710 70.323 6.87e-82 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto12g0695 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0695 - - jre:108981378 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0695 12 4414062 4417059 Sto12g0695 12 4414062 4417059 ECH