Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0690 CTGCCATGGAAGCTGAAGCAGAGGAGCAACAAAGATGTGATCAGAAAGAGAGTGTATGTGTGTCCGGAGAAGACCTGCGTCCACAACCACCCTTCCAGAGCTCTCGGCGACCTCACCGGCATCAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCCAAAAGTGCTCCAAGCGTTACGCTGTTCAGTCTGATTGGAAAGCTCACTCCAAAACTTGTGGCACACGAGAGTATAAATGTGACTGTGGCACCATCTTTTCACGGAGGGATAGCTTCATCACGCATAGGGCGTTCTGTGATGCCTTGGCAGAAGAAACGGCTAGAGTAAACGCAGCATCCagcatcaacaacaacaacaacattcTAAGTTACAACAACAACATTATGGGAATGGGGCCTACCATGAATATGGCAACCCATTTCCCTTCAATGTTGAAGCCAATTTCAAACACCACCCATGAAGAAGAAGCAAATAATCAAACACCTAGAGGGCTATCTCTGTGGAATAATAATATGGTTGATCATCAATCTCATGCTGCAGATCCCACACTTTATAACgctaatattcatcaatttgggATGAACCACAATAATCATCCACCACTTgtctctcatcatcatcatcatcagcagcagcagcagctaaATTGGGTGTTTGGGAATAGTAATAGTAACAGTAAGCTAATTTCAAATAATTCTGCGTCATGTGAAGAGCTAACAAGTGGAAGCTGCCAGCAGTTGATAAGTGTTCCTTCCCTGTATAGCTCCCAGCATCATCAAACGACGTCGTTGTCGTCCGCGGCTAACATGTCAGCCACGGCTTTATTACAGAAAGCTGCTCAAATAGGATCGGCAACTTCTTCCACTACGCCTGACCCATCAATATTCCTTGGAAGCTTAGGGTTCAAATGCACTACTACTACTGAAGATGATCATCTAATTGTTGGGAGGCATAATatgaatattaataataatagcaaCAAATACTGCGGGAATATGTACGGTTCAGACTCGGTGCTCACTAGCGTTGGTGGTGGAGGAAGCGATGAGACAGATCACAACACCACCTCTCCCGGTGAATTGTCGCAAATGCACCCACCCAAACGCCGCCAACTAGTACACGGGACTGAGGAAATTGCCGCACCAGGAGGGGGGCAAACTAGGGATTTCCTTGGTGTTGGTGTGCAAACCATTTGCCACCCTTCATCAATCAATGGATGGATTTGA 1236 0.4296 LPWKLKQRSNKDVIRKRVYVCPEKTCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCQKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASSINNNNNILSYNNNIMGMGPTMNMATHFPSMLKPISNTTHEEEANNQTPRGLSLWNNNMVDHQSHAADPTLYNANIHQFGMNHNNHPPLVSHHHHHQQQQQLNWVFGNSNSNSKLISNNSASCEELTSGSCQQLISVPSLYSSQHHQTTSLSSAANMSATALLQKAAQIGSATSSTTPDPSIFLGSLGFKCTTTTEDDHLIVGRHNMNINNNSNKYCGNMYGSDSVLTSVGGGGSDETDHNTTSPGELSQMHPPKRRQLVHGTEEIAAPGGGQTRDFLGVGVQTICHPSSINGWI 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0690 411 PANTHER F-BOX ASSOCIATED PROTEIN 1 408 - -
Sto12g0690 411 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 408 - -
Sto12g0690 411 MobiDBLite consensus disorder prediction 344 365 - -
Sto12g0690 411 MobiDBLite consensus disorder prediction 344 370 - -
Sto12g0690 411 Gene3D Classic Zinc Finger 12 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0690 Sto-Chr12 4391191 4392878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0690 1 411 IDZ Gene Family AT1G03840 45.778 2.31e-105 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto12g0690 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0690 K25870 - qsu:112011855 384.8