Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0683 ATGAGGCAGTGCAATGATGAGGATGATCAAAACAACAGTCACAGCAATATCAATATTGTGGGGAAATCAAGAACTTGTCCTTCATGTGGCCATCATATCAAATGCCAAGACCAGCTACCTGGACTGCCTGCTGGAGTGAAGTTTGATCCGAGTGATCAAGAGCTTTTGGAACATTTGGAAGCGAAGGTGAAGTCTGATATTCAAAAGCTTCATCCATTGATTGATGAGTTCATTCCCACTCTGGAAGGCGAGAATGGAATTTGTTATACTCATCCCCAGAAGTTGCCAGTTAGCAAAGACGGGCTTATCCGGCATTTCTTTCATAGGCCATCAAAAGCATACACCACAGGaacaagaaaaaggagaaaggtACACTCAGAAGAAGCAGATGGAAGTAGCTGTGAGACAAGGTGGCACAAAACAGGGAAGACAAGACCAGTGTACATGAAAGGCAAGCTAAAAGGGTACAAGAAGATCCTTGTGCTTTACACCAACTATGGAAAGCAAAGGAAGCCTGAGAAAACTAACTGGGTCATGCACCAATACCACCTAGGAAATAACGAAGAGGAGAAAGAAGGGGAGTTAGTGGTGTCCAAGGTTTTCTATCAGACACAACCTAGGCAATGTGGTTCTCTCCTTCTAAAGCAGGGAGGAGGACAAGCTGAGCATCAAAATCAACATCATGATAATCACAAGAACATTAATAGTAATGGCGGCTTTGTTCATCAGTATTATAATTCTGCTTTCATATCCTTTGATCAAGGTGGCCAACATAGATCAACCAATGCTGCTCAACTCATTTCTCACTTTCCACTTCATGATGCATCTCCTTTCATTGCTTGA 843 0.4176 MRQCNDEDDQNNSHSNINIVGKSRTCPSCGHHIKCQDQLPGLPAGVKFDPSDQELLEHLEAKVKSDIQKLHPLIDEFIPTLEGENGICYTHPQKLPVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSEEADGSSCETRWHKTGKTRPVYMKGKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGSLLLKQGGGQAEHQNQHHDNHKNINSNGGFVHQYYNSAFISFDQGGQHRSTNAAQLISHFPLHDASPFIA 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0683 280 Gene3D NAC domain 51 207 IPR036093 GO:0003677|GO:0006355
Sto12g0683 280 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 279 IPR044799 GO:0003700
Sto12g0683 280 ProSiteProfiles NAC domain profile. 42 203 IPR003441 GO:0003677|GO:0006355
Sto12g0683 280 SUPERFAMILY NAC domain 38 203 IPR036093 GO:0003677|GO:0006355
Sto12g0683 280 Pfam No apical meristem (NAM) protein 43 184 IPR003441 GO:0003677|GO:0006355
Sto12g0683 280 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0683 Sto-Chr12 4356824 4358376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0683 1 210 NAC Transcription Factor Family AT4G28500 68.860 5.98e-109 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto12g0683 NAM 4.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0683 - - gmx:100797459 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0683 12 4356824 4358376 Sto12g0683 12 4356824 4358376 ECH