Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0681 ATGTTTCtcttgcttctccttctcttcctctctccTCCTCCCCTCACTCTCTCTCTATCCAAAGACGGTCTCTTCCTCCTCCAACCCAAGCATCAACTCGACGACCCCTCCAATGCACTTTCCAACTGGAACCCCCGTGATGCTTCTCCCTGCAAGTGGTTCGCCGTCACCTGCGACTCACTCTCCGGCGACGTCACTTCCCTCAACTTCTCCAACTTCCAGCTCGCCGGACCCTTCCCCACTGTCCTCTGCCGCCTCCCTTCTCTTACAAACCTCTCCTTCTACAACAATCTCATCAACTCTTCAATCCCTCCCAATATCGCCAACTGTAGTCGTCTCCAGTATCTCGACCTCTCCCAGAACACCTTCGTCGGTCCCATTCCGGAGACGCTCTCGCAAATTCCAACTCTCCGGTATCTGGACCTCTCGTTCAATAACCTCTCCGGCGATGTTCCGGCGAGGTTCGGTGAATTCCGGCAACTCGAGTCGCTTTTGCTCGTTTATAATCTCCTGAACGGAACAATTCCAAGTTCTCTTGGTAACATTTCGACCCTCAAAAAGCTTCAACTCGCTTATAACCCCTTCGTTCCGAATCCGTTACCGGAAGAATTCGGTAACCTGACGAATGTCGAGGATCTATGGCTCGCTTCGTGTAACTTCGTGGGGTCCATTCCGGCATCGCTGGGCCGTCTCACTCGGCTCCAGAACCTCGACTTGTCCCTAAACAGTCTCAATGGGTCAATTCCGAGATCAATTGTGGGGATGAAAAGCGTCGTTCAAATCGAGCTTTATCAGAACTTTTTATCCGGCGAGTTGCCTCCGGGAATGTCAAGCATGACGAATCTGAGACGATTTGATGCATCGATGAATAATTTGAGTGGGACGATTCCTGATGAATTGTGCCGGCTGAAGCTCGGATCTCTGAATTTGTACGCTAATCAAATTGAAGGGTCTTTGCCAGAAAGTATAGCTCTGTCTCCGAATCTGTACGAGCTCAAATTGTTCAACAACAAGCTTAAAGGTCGATTGCCGAGTGCACTCGGTAACAACTCGCGCCTACTGAATCTAGACGTTTCGTATAACCAATTTTCTGGCGAAATACCGGAAAATCTGTGCAGAGGCGGCGTGTTGGGAGATTTGATTTTGATATACAATTCATTTTCTGGGGAAATTCCTCGGAGTCTGGGAGAGTGTTCGAGCTTGAACAGAGTTCGGCTTAGGAATAATAATCTCTCAGGCATAGTTCCTGATGCTCTCTGGGGTTTACCTCATCTGTATTTGCTTGAGCTTACTCATAATTCACTATCTGGGCATATTTCCAGTGCAATATCTGGTGCTCGTAATCTGTCACTTTTGTTGATTTCTGACAACCAGTTTTCTGGGTCTTTACCCAAAGAGATTGGGTCGTTGAATAATCTTGTTGAGTTTGTTGGCTGCCAGAATAGTTTTACAGGTCAGATTCCGGCGAGTATGGTCAAGTTGAGCCAATTGGGTAAGCTTGATCTCAGTGAAAATAAACTTTCTGGAGCAGTTCCTAGAGGAATTAGTGCTTGGAATAAGCTCAATGAGCTTGACTTGGCAAACAATAGGTTTGATGGGGAGATACCAAACGAAATAGGGAGCTTGCCTGTGCTTAATTACCTTGATCTTTCTAGCAATCGATTCTCCGGTGAAATTCCATCTGAGTTGCAAAATTTGAAGCTTAATTTGCTGAATTTGTCAAATAATCTGCTTTCTGGGGATATCCCTCCTCTTTATGATAATGAGAATTATAGAAAGAGTTTTCTAGGAAATCTAGGCCTCTGTGGCGATCTCTATGGCCTTTGTCCAACCTTTAGTGAAAGTAAGAACCGGAGGTATCTGTGGATTTTGCGGTCAATGTTTGTACTTGCCGGTATTGTATTTGTCGTGGGGGTTGCTTGGTTTTACTTGAAATACAGAAACatcaagaagatgaagaaaggaTTTAACATGTCAAAGTGGAGGTCATTTCATAAGTACGGCTTCAGCGAGTTTGAGATTATTAAATTGCTGAATGAAGATAACGTAATTGGGAGTGGAGCATCTGGGAAGGTCTACAAAGTAGTCCTTAGCAGTGGCGAGGCAGTGGCGGTGAAGAAACTCTGGAGATCAACTAGGAAAGAAGATGGAACTGTTGGCTCTGACGAAAAAGATGAATTCGAAGTTGAAGTTGAAACATTGGGAAAGATCAGACACAAGAATATTGTAAGGTTGTGGTGTTGCTGCAACAATGGAGACAACAAGCTTCTAGTTTATGAATATATGCCAAATGGAAGCTTGGCTGACATATTGCATAGCAGCAAGAAAAGCTTATTGGATTGGCCAACCAGGTGTAAAATTGCCATTGATGCTGCTGAGGGACTTTCTTACTTACACCATGATTGTGTCCCCCCAATTGTTCATAGGGATGTAAAATCTAACAATATATTGCTAGATGGAGAGTTTGGGGCAAAAGTTGCAGATTTCGGAGTAGCAAAAATGTTCAGGGGAGTCAGCCAAGGTGCAGAATCAATGTCTGTAGTTGCAGGATCTTATGGTTACATTGCACCAGAATATGCCTATACTCTTCGGGTGAATGAAAAGAGTGACATTTATAGCTTTGGAGTGGTTATTCTGGAATTGGTAACTGGGAAACCCCCAATTGATTCAGAGTATGGAGAACAAGATTTGGTGAAATGGGTTTCTTCCACATTGGATCAGAAAGGAATAGAGCAAGTGATTGATCCTTGTCTTGATTCCAAATACAAGGAAGAAATCAGCAAGGTACTTAGTGTGGGTCTCCTTTGCACAAGCTCTCTTCCTATAACCCGACCTTCCATGCGTAGAGTGGTGAAGATGCTGCAGGAAGCTTCTGCAGATCCTAAATCCAGAAGTGGGAAGAAGGGTGGAAAACTCTCCCCTTATTATCATGAAGAAGCCTCTGATCAGGGAAACATAGTTtga 2964 0.4396 MFLLLLLLFLSPPPLTLSLSKDGLFLLQPKHQLDDPSNALSNWNPRDASPCKWFAVTCDSLSGDVTSLNFSNFQLAGPFPTVLCRLPSLTNLSFYNNLINSSIPPNIANCSRLQYLDLSQNTFVGPIPETLSQIPTLRYLDLSFNNLSGDVPARFGEFRQLESLLLVYNLLNGTIPSSLGNISTLKKLQLAYNPFVPNPLPEEFGNLTNVEDLWLASCNFVGSIPASLGRLTRLQNLDLSLNSLNGSIPRSIVGMKSVVQIELYQNFLSGELPPGMSSMTNLRRFDASMNNLSGTIPDELCRLKLGSLNLYANQIEGSLPESIALSPNLYELKLFNNKLKGRLPSALGNNSRLLNLDVSYNQFSGEIPENLCRGGVLGDLILIYNSFSGEIPRSLGECSSLNRVRLRNNNLSGIVPDALWGLPHLYLLELTHNSLSGHISSAISGARNLSLLLISDNQFSGSLPKEIGSLNNLVEFVGCQNSFTGQIPASMVKLSQLGKLDLSENKLSGAVPRGISAWNKLNELDLANNRFDGEIPNEIGSLPVLNYLDLSSNRFSGEIPSELQNLKLNLLNLSNNLLSGDIPPLYDNENYRKSFLGNLGLCGDLYGLCPTFSESKNRRYLWILRSMFVLAGIVFVVGVAWFYLKYRNIKKMKKGFNMSKWRSFHKYGFSEFEIIKLLNEDNVIGSGASGKVYKVVLSSGEAVAVKKLWRSTRKEDGTVGSDEKDEFEVEVETLGKIRHKNIVRLWCCCNNGDNKLLVYEYMPNGSLADILHSSKKSLLDWPTRCKIAIDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGEFGAKVADFGVAKMFRGVSQGAESMSVVAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKPPIDSEYGEQDLVKWVSSTLDQKGIEQVIDPCLDSKYKEEISKVLSVGLLCTSSLPITRPSMRRVVKMLQEASADPKSRSGKKGGKLSPYYHEEASDQGNIV 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0681 987 SMART LRR_typ_2 494 518 IPR003591 -
Sto12g0681 987 SMART LRR_typ_2 231 255 IPR003591 -
Sto12g0681 987 SMART LRR_typ_2 86 110 IPR003591 -
Sto12g0681 987 SMART LRR_typ_2 398 421 IPR003591 -
Sto12g0681 987 SMART LRR_typ_2 542 565 IPR003591 -
Sto12g0681 987 SMART LRR_typ_2 422 446 IPR003591 -
Sto12g0681 987 SMART LRR_typ_2 279 303 IPR003591 -
Sto12g0681 987 SUPERFAMILY L domain-like 37 371 - -
Sto12g0681 987 Gene3D Phosphorylase Kinase; domain 1 646 761 - -
Sto12g0681 987 SUPERFAMILY Protein kinase-like (PK-like) 676 955 IPR011009 -
Sto12g0681 987 SMART serkin_6 678 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0681 987 MobiDBLite consensus disorder prediction 961 975 - -
Sto12g0681 987 Pfam Leucine rich repeat N-terminal domain 20 59 IPR013210 -
Sto12g0681 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Sto12g0681 987 ProSiteProfiles Protein kinase domain profile. 678 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0681 987 Gene3D Ribonuclease Inhibitor 308 611 IPR032675 -
Sto12g0681 987 ProSiteProfiles Leucine-rich repeat profile. 567 589 IPR001611 GO:0005515
Sto12g0681 987 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 2 977 - -
Sto12g0681 987 Pfam Protein kinase domain 680 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0681 987 ProSitePatterns Protein kinases ATP-binding region signature. 684 707 IPR017441 GO:0005524
Sto12g0681 987 SUPERFAMILY RNI-like 306 583 - -
Sto12g0681 987 Pfam Leucine rich repeat 87 147 IPR001611 GO:0005515
Sto12g0681 987 Pfam Leucine rich repeat 400 459 IPR001611 GO:0005515
Sto12g0681 987 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 2 977 - -
Sto12g0681 987 MobiDBLite consensus disorder prediction 955 987 - -
Sto12g0681 987 Gene3D Transferase(Phosphotransferase) domain 1 762 973 - -
Sto12g0681 987 Gene3D Ribonuclease Inhibitor 196 307 IPR032675 -
Sto12g0681 987 Gene3D Ribonuclease Inhibitor 18 195 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0681 Sto-Chr12 4350574 4353665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0681 14 987 Receptor kinase-like Gene Family AT1G28440 62.209 0.0 1211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto12g0681 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0681 - - zju:107417190 1306.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0681 12 4350574 4353665 Sto12g0681 12 4350574 4353665 ECH