Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0679 ATGGAGGCTGGTTCAgaaggagagaagaagaagctacCCGAGGGAGAGAACAAGACCAAGCGCAAAATGAAGACTGCTGCCCAGTTGGAGATTCTGGAGAAAACATATGCTGCTGAAGCTTACCCGTCAGAGGCGTTGCGAGCAGACCTATCCGTGAAATTGGGCCTTTCAGATCGTCAACTTCAGATGTGGTTTTGTCACCGTAGGTTAAAGGACAGAAAGGCACCAGCAGCAAAGGGGCCGCAAAATGATTCGCCTCCTGGAGCCGGGGCTCCGAGGCCAGTGAATGATGGTGTTGAGCATATGACAACGAGTGATGCCGGGCACGAGCGTGGTTCCTTTTCCGGGTTGAGGCCATCAATTCAGATGGATTCCCGGCGAGCTGTCCCACGACCTGGGACGGCATTTCCTAGGATGGGAGGGGTAGCAATGGAGAGTTACTATGAATCACATCAGTCCATTGATGAGCTGAGAGCTATTAGATTCGTGGAAGCACAATTAGGGGGGCCATTAAGAGAGGATGGGCCAATTTTGGGGATGGAATTTGATCCCTTGCCACCGGGTGCTTTTGGTGCACCAATTGGGCATGGTACAATGGGGCAGCATAGGCAGTCAGGAAAACCCTTTGAGGCAAAAATTTATGAACGACTGGAAAAGGGTGTTTCAAGGACTCTCCATGAGTACCAATTTATTCCAGAGCAACCAACTGTTAGAAACGAGACATATGACTATGAGAGAGTTGCCTCTTCTAACCACTACAGTTCTCTTGATGGTATTTCACATGCAAGGTCTTCATTATCTAGCGGGAAGCCATTCTTTAATGGGAATGAAACTGCTTACCATGGATATGGATATCAAGGTCATATGCCAGGTTTAAATCTATTGTCTCAGCAAGCCAGGCAGAATCATCTTTTACCTTCTGCTTCAGGAGAGAAGGATAATGTTCCATGGAAGAACCCATTTGCTGAGGTGCCTATTGACACTCATATTGGGGCTGACCCAGTAACTCAGATTGATAGAACATCAATGCCATCTGACAGGAAGGTTATCCATGAGGAGGAAGTTTTGCGGTttcagaggaagaggaagAGTGAAGAGGCAAGAATGCAACGGGAAATTGAGGCACAAGAGAAAAGAGTCAGAAAAGAGCTTGAAAAACAGGATATTTTAAGGCGAAAGAGAGAAGAACAAGCAAGAAAGGAGATGGAGAAGCATGAACGTGAAAGGCGGAAGGAAGAGGAAAGGTTATTGCGTGAAAGACAGCGAGAGGAGGAAAGATACCAAAGAGAGCAGAGGCGTGAATTGGAGCGAAGGGAGAGGATTTTGCAGAAGGAGTCAATCAGAGCTGAGAAAATGAAACAGAAGGAAGAATTACGCAGAGAGAAAGAGGCAGCAAGGATCAAAGCAGCCAATGAGAGAGCTATTGCTCGGAGAATAGCCAAAGAATCAATGGAACTAATTGAAGATGAACGATTGGAATTGATGGAGTTGGCTGCAGCAAAGAAGGGGCTTTCTTCAATTCTGTCTCTTGACTATGAAACTTTGCAGAACCTTGAATTATTTAGAGAGGGGCGGGTTTCATTTCCACCGAAGTCTGTACTGTTGAAAAGACCTTTTTCAGTTCAACCTTGGTTGGATTCTGAGGAGAATGTAGGAAATCTTTTGATGGCTTGGAGGTTTTTAATCTCCTTTGCAGATGTTCTTGGGACGTGGTCATTCACCTTAGATGAATTTATACAAGCTTTCCATGATCACGATTCAAGGTTGTTAGGTGAGATTCATATTGCTCTTCTGAGATGCATTATAAAAGATATTGAAGATGTTGCAAGAACACCTACTGGGTTAGGAGCTAATCATAGCAATGCTGCCAACCCTACTGGGGGTCATCCACAAGTAGTTGAAGGGGCTTATGTGTGGGGGTTTGACATAAGAAATTGGCAGCAACTCTTAAATCCATTAACTTGGCCAGAGATTATGCGGCAATTTGCTTTGTCAGCAGGATTTGGGCCACAATTGAAGAAAAGGAATATTGAGCAGGTGTCTCCTGATAATAATCAGGGTATTGATGGTGAAGATATAATTTCTAATCTACGTAGTGGAGCAGCAGTTGAAAATGCAGTTGCTATCATGCAAGAAAAGGGGTTATCTAATTCCAGAAGGTCCAGGCATCGCTTGACACCTGGAACTGTTAAGTTTGCAGCATTTCATGTCCTATCGCTTGAAGGAAGCAATGGTCTTACTATATTGGAAGTTGCAGACAAGATTCAGAAATCTGGACTTCGTGATCTTACAACTAGCAAAACTCCAGAGGCTTCTATAGCTGCTGCTTTGTCCAGAGACACAAAGCTTTTTGAAAGGACAGCTCCTTCCACATATTGTGTGCGTCCTGCATATAGAAAGGATCCATCTGATGGTGAGGCAATCCTGTCAGCTGCCAGGGAAAGAATCAGGATATTCAAAAATGGATTTGTTGATGCAGAAGAACCAGATGATGGTGAAAGGGATGATGATTCTGAAATTGATATGGCAGAAGATCCTGAGGTTGATGATTTAGGTACGGAATCAAATAATAAGAAGGAGGTCCCCAACTTAGTGGAATCTAATTCGAGCACTGTTAAGATCAGGGAGGACAGTGATATAATTTTGCAAACTCCTGATGGTGGCCATGGGCATATGAATAAGGATTTAGGTTCCATTGTTGTTGAAGGATTTAATCAGGAAATTGTCGGTAGCAGTAACGATGTGGCTAATCTTGATCTGGAAGACACCATTATTGATGAAAGTAATCTGGGTGAACCATGGGTTGAAGGGCTCACGGAAGGGGAGTACTCAGATCTTAGTGTTGAGGAGCGACTTAATGCTCTTGTTGCTTTGATCGGTGTGGCAATTGAAGGGAATTCAATTCGTGTTGTTCTCGagGAGCGTCTAGAAGCAGCAAATGCTTTAAAGAAGCAGATGTGGGCAGAGGTACAGCTTGATAGACACCGAATCAAAGATGACTACCTTTTCAAGATGCAGTCTGCCCCTTGTATGGGCAATAAGAATGAACCAACTCCTATAATTCCATCAACAGAGGGTAAACAGAGCCTTCTGCTAAATGTCGATGACAAAAATGACAAGTTAGCGGAAACTTCCCCTGCCCAGCAAGTACAGATAAATAGTCTACAGGAAAATCAGACTCATCTCCAGATTTTCCCATCAGAGGTGAACATGCATATGCATGAATCTGCTGTCCCTGATAATTTTTCTCACCAACAATTTGGATATGGTGCTGAGAAGCCAAGGTCAAATTTCAAATCATACATTGGTCACTTGGCAGAAGAAACTTATATGTATAGGTCGTTGCCTCTTGGTTTGGATCGGAGACGTAATCGATACTGGCAGTTCATTACATCCACTTCTCAAAACGATCCAGGCTGTGGCAGGATATTTGTGGAGTTGCATGACTGTCATCATTGGAGGCTGATTGATTCTGAACAGGATTTTGATGCTCTTTTGGAATCGTTGGATGTACGAGGTGTCAGGGAATCCCATTTGCACATGATGTTGCAAAGAATTGAGATGTCCTTCAAGGAATCCGTTAGAAGGAATTACAGGAGAAGGGAAAATGGGGACACTGCCAATACAGAAACTTTTCAAATGGCCGCAGAGCAAGATTGTAGTTCTTCTATAGCTAATTTGGATATATCAGAGACCTCAACGTCTTTTGTTGTTCAGCTTGGAAGGAATGTTTCCGATAACAAAGATGCTTTAAGGAGATACTGGGAATTTGAAAAATGGACGCTGACAGAATGCCTAAATTCTTCTCTATTATGTGCAATGAAGTTTGGGAAGAGAAGATTCAGCCAATCGCTGGGCATGTGTGATTATTGCCATGAAATCTATTTATCTGAAGAAATACCATGCCCTTCATGTCATAGAACCTTTTGTTCTTGTAAGAGCAACTTAAGTTCTTCTGAACATATGGTTCACTGTGAAGGAAAAGTGAAGAGTGCCATTGATTATACAATTAATATCTCATCCTCTTCTCCATTGAGGGTGAGGCTACTCAAAGTGCTGTTATCAATTGTTGAGGTTTCCattcttgaagaagctcttaaacctcTATGGACAGATAACTACCGGAAATCTTGGAGTACAAAGCTGCATGCATCTTCCTCCTCTAAAGACCTTCTTGAGATACTGACTATACTGGAAGATGGTATAAAGAGGGATTATTTGGCTTCAAACTTCAAGACAACTAGTGAGCTTTTGGGTTCCGTTATTTTTTCTGGATGCCATAATGATTCCATAAGTGCTGAAAGGATTCCTATACTTCCGTGGGTGCCTCATACAACATCTGCTGTGGCACTAAGGCTCTTGGAACTTGACATGACCACCTTTTATACCTTAGAGCAGAAGCAGGAGTCTGAAAAGGACAAGACAATTGAGGATCTTACGAAGTTCCCCACAAAATACGCATCTGCCAAGAACTCCCAAGATGCTTGTGCAGCTGAATCTGGCCATAACTTAGTTGATCTGGGTGTTGGATTTGCAAGCTACAGCCGAGGACAAAGGTCCCGTGTACAGAGCCGTGGTCAAACTCGTGGTGGAAGATCACAGTCAAGGGCCACTAATTCGAGATCTGAATCTAGAAAGAAAGTTACTGCCACTAGCAGCAGGAAACTCGGGCAGGTACTAAGATGGAAAGGGAAATCTCGCGGACATGGAGGGCTTGGCCGTGCACGGAGGAGTATTAGAAGCAGCAGGCAGAAACCAGCAGCAGCTAAGGTGCATGAGATCAGTGGTGAGACTGAAAGGGATGCTCCCAAAGAGGAATCAGCTGGTATTTATGAAAGGGAGGAGACAAATGAAGCTGGAACCATTGGTTTCCAAATGGACGTTGCTGGAAATGCTGGCAGTTCAGGGAGATCAGACTATGAGGATGATAATTATCAAGCAACACCTGACGAGTATGAGTATCTGGTGGATAATAATGTTGAAGGCTATGGAGGTGGATTTAGTGGGAAGTCTGAGAACATGGCAGAAGGGAGCGATTATAatgaggatgatgatgaagctGAGGATATTGATGAGGATGATGGAAGGATTGATGTTGATGTTGAACACTTCATGAATGGGGATTCAGATATAGGGGAAGACGGAGATGAAGCAGAGCAAAACATGAATCCAGATGGATTGAGCTCTACATCCTCAGAGTTCAGTGACTAA 5211 0.4297 MEAGSEGEKKKLPEGENKTKRKMKTAAQLEILEKTYAAEAYPSEALRADLSVKLGLSDRQLQMWFCHRRLKDRKAPAAKGPQNDSPPGAGAPRPVNDGVEHMTTSDAGHERGSFSGLRPSIQMDSRRAVPRPGTAFPRMGGVAMESYYESHQSIDELRAIRFVEAQLGGPLREDGPILGMEFDPLPPGAFGAPIGHGTMGQHRQSGKPFEAKIYERLEKGVSRTLHEYQFIPEQPTVRNETYDYERVASSNHYSSLDGISHARSSLSSGKPFFNGNETAYHGYGYQGHMPGLNLLSQQARQNHLLPSASGEKDNVPWKNPFAEVPIDTHIGADPVTQIDRTSMPSDRKVIHEEEVLRFQRKRKSEEARMQREIEAQEKRVRKELEKQDILRRKREEQARKEMEKHERERRKEEERLLRERQREEERYQREQRRELERRERILQKESIRAEKMKQKEELRREKEAARIKAANERAIARRIAKESMELIEDERLELMELAAAKKGLSSILSLDYETLQNLELFREGRVSFPPKSVLLKRPFSVQPWLDSEENVGNLLMAWRFLISFADVLGTWSFTLDEFIQAFHDHDSRLLGEIHIALLRCIIKDIEDVARTPTGLGANHSNAANPTGGHPQVVEGAYVWGFDIRNWQQLLNPLTWPEIMRQFALSAGFGPQLKKRNIEQVSPDNNQGIDGEDIISNLRSGAAVENAVAIMQEKGLSNSRRSRHRLTPGTVKFAAFHVLSLEGSNGLTILEVADKIQKSGLRDLTTSKTPEASIAAALSRDTKLFERTAPSTYCVRPAYRKDPSDGEAILSAARERIRIFKNGFVDAEEPDDGERDDDSEIDMAEDPEVDDLGTESNNKKEVPNLVESNSSTVKIREDSDIILQTPDGGHGHMNKDLGSIVVEGFNQEIVGSSNDVANLDLEDTIIDESNLGEPWVEGLTEGEYSDLSVEERLNALVALIGVAIEGNSIRVVLEERLEAANALKKQMWAEVQLDRHRIKDDYLFKMQSAPCMGNKNEPTPIIPSTEGKQSLLLNVDDKNDKLAETSPAQQVQINSLQENQTHLQIFPSEVNMHMHESAVPDNFSHQQFGYGAEKPRSNFKSYIGHLAEETYMYRSLPLGLDRRRNRYWQFITSTSQNDPGCGRIFVELHDCHHWRLIDSEQDFDALLESLDVRGVRESHLHMMLQRIEMSFKESVRRNYRRRENGDTANTETFQMAAEQDCSSSIANLDISETSTSFVVQLGRNVSDNKDALRRYWEFEKWTLTECLNSSLLCAMKFGKRRFSQSLGMCDYCHEIYLSEEIPCPSCHRTFCSCKSNLSSSEHMVHCEGKVKSAIDYTINISSSSPLRVRLLKVLLSIVEVSILEEALKPLWTDNYRKSWSTKLHASSSSKDLLEILTILEDGIKRDYLASNFKTTSELLGSVIFSGCHNDSISAERIPILPWVPHTTSAVALRLLELDMTTFYTLEQKQESEKDKTIEDLTKFPTKYASAKNSQDACAAESGHNLVDLGVGFASYSRGQRSRVQSRGQTRGGRSQSRATNSRSESRKKVTATSSRKLGQVLRWKGKSRGHGGLGRARRSIRSSRQKPAAAKVHEISGETERDAPKEESAGIYEREETNEAGTIGFQMDVAGNAGSSGRSDYEDDNYQATPDEYEYLVDNNVEGYGGGFSGKSENMAEGSDYNEDDDEAEDIDEDDGRIDVDVEHFMNGDSDIGEDGDEAEQNMNPDGLSSTSSEFSD 1736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0679 1736 Coils Coil 366 393 - -
Sto12g0679 1736 ProSiteProfiles 'Homeobox' domain profile. 15 75 IPR001356 GO:0003677
Sto12g0679 1736 Gene3D - 10 87 - -
Sto12g0679 1736 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1113 1186 IPR028941 -
Sto12g0679 1736 MobiDBLite consensus disorder prediction 1722 1736 - -
Sto12g0679 1736 MobiDBLite consensus disorder prediction 1 23 - -
Sto12g0679 1736 MobiDBLite consensus disorder prediction 1567 1583 - -
Sto12g0679 1736 MobiDBLite consensus disorder prediction 1678 1696 - -
Sto12g0679 1736 MobiDBLite consensus disorder prediction 823 869 - -
Sto12g0679 1736 MobiDBLite consensus disorder prediction 828 850 - -
Sto12g0679 1736 SMART HOX_1 17 79 IPR001356 GO:0003677
Sto12g0679 1736 Pfam Homeodomain 18 74 IPR001356 GO:0003677
Sto12g0679 1736 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1736 - -
Sto12g0679 1736 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 932 973 IPR028942 -
Sto12g0679 1736 Pfam HB1, ASXL, restriction endonuclease HTH domain 728 795 IPR007759 GO:0006355
Sto12g0679 1736 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1736 IPR044977 GO:0006357
Sto12g0679 1736 SUPERFAMILY Homeodomain-like 14 74 IPR009057 -
Sto12g0679 1736 SMART testlast3 548 607 IPR018501 -
Sto12g0679 1736 MobiDBLite consensus disorder prediction 1586 1613 - -
Sto12g0679 1736 MobiDBLite consensus disorder prediction 1516 1736 - -
Sto12g0679 1736 Coils Coil 395 475 - -
Sto12g0679 1736 ProSiteProfiles DDT domain profile. 548 607 IPR018501 -
Sto12g0679 1736 MobiDBLite consensus disorder prediction 73 135 - -
Sto12g0679 1736 MobiDBLite consensus disorder prediction 395 415 - -
Sto12g0679 1736 MobiDBLite consensus disorder prediction 1516 1538 - -
Sto12g0679 1736 ProSiteProfiles HARE-type HTH domain profile. 728 797 IPR007759 GO:0006355
Sto12g0679 1736 CDD homeodomain 18 74 IPR001356 GO:0003677
Sto12g0679 1736 Pfam DDT domain 549 604 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0679 Sto-Chr12 4326459 4337149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0679 1 1734 Homeobox Transcription Factor Family AT5G44180 47.017 0.0 1337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Sto12g0679 WSD 2.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0679 - - gmx:100797480 1984.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0679 12 4326459 4337149 Sto12g0679 12 4326459 4337149 ECH