Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0665 ATGAATCAGTACTTTTTACTCATAGCATGCCTACAGCTATGGCCCCTCATCACTCCTGTAAATCCCGCCAGTACATGGGGTCCACTTATCTTCATTTTTGCAGTATCTGCAACAAAAGAGGCTTGGGATGATTACAATCGGTACCTGTCAGACAAGAAGGCAAATGAGAAGGAAGTCTGGGTTGTCAGCAAAGGCATTAAGAAACTTGTACGAAAACTGAACTTTTTCCCCCTATCTGCCCCCAACATTGTTCATGCTTTGAGAACAGAACAACAAAACTGTAAAAGAAAGACACATAGGAGGATAGACTTAAAGATCCAAGCCCAGGATATACATGTAGGTACTATAGTATGGCTACGTGAAAATGATGAGGTGCCATGCGACCTTGTTTTGATTGGCACCTCTGATCCCCAAGGACTTTGCTATATAGAGACCTCTGCGCTTGATGGTGAAACTGATCTGAAGACAAGGGTCATACCTTCTGCTTGCATGGGAATAGATGTTGAACTATTGCACAAAATTAAGGCAAGGTTTTCTTTAGTAACTTCAGGTGTAATTGAGTGCCCTGGTCCAGATAAAGACATCAGAAGATTTGATGCAAATATGCGGTTGTTTCCCCCATTTATTGATAATGATATGTGCcctttaacaataaaaaacacCATTCTTCAGTCATGCAATGAAACCAAGCTGGGGATGAGTAGGGGTATCCCAGAACCAAAGCTCACTGCTATGGATGCCATGATTGACAAGTTGACTGGTGCTATTTTTGTTTTCCAAATTGTGGTTGTTATAGTTCTTGGTATAGCGGGTAATGTTTGGAAGGATACAGAAGCAAAGAAACTATGGTATGTTCGTTACCCAACTGAGGGCCCTTGGTTTGAACTATTGGTGATTCCTCTGCGATTTGAGCTTCTTTGTTCCATCATGATACCCATTTCAATTAAGGTATCTCTAGATCTGGTGAAAAGCTTGTATGCAAAATTTATTGATTGGGACCATCAGATGATTGACACAGAAACTGCTATTCCATCTCATGCAACAAATACAGCGATAAGCGAGGACCTGGGACAAGTTGAGTACATATTGACTGACAAAACAGGCACCCTCACTGAGAATAAGATGATTTTTAAAAGATGTTGTATCAATGGCATTTTttatggaaatgagaatggcgATGCAGTGAAAGATGTAGAGCTTCTTAATGCTGTTGCCAGTGGTTCCCCTGATGTTGCACAGTCTCAGGATGAGGATGCTCTTGTAAATGCTGCTACTCGGTTGCATATGGTTTTCTTCAATAAGAATGGAAACATTCTTGAAGTCAAGTTCAATTCTTCAATACTGAATTATGAAATCCTGGAAACCCTAGAATTCACCTCTGATAGGAAAAGAATGTCAGTAGTGGTGAAAGATTGCCAGAATGGGAAGATCCTTCTTCTATCAAAAGGAGCTGATGAGGCAATTCTTCCACATGCTCGTGCTGGGCATCAAACCCGGAATTTTATTGAAGCTGTGGAACAATATGCTCACATGGGACTACGTACACTATGTTTGGCTTGGCGGGAGTTAAAggaagatgaatatcaagaatgGTCTTTGATGTTTAAAGAGGCCAACAGCACTTTGGTTGATAGGGAGTGGAGAGTAGCTGAGGTCTGCCAAAGAATTGAACACAACTTGGAAGTTCTTGGTGTAACAGCAATAGAAGATCGTTTACAGGATGGAGTTCCTGAAACAATTGAAACACTAAGAAAGGCTGGAATAAATTTTTGGATGCTAACTGGAGACAAGCAAAATACTGCTATACAAATTGCCCTGTCGTGCAATTTTATTTCCCCAGAGCCAAAGGGACAACTTCTATCAATTGACGGCAAAACAAAAGACGAGGTTCGTAGAAGTCTGGAGAGAGTGCTTCTTACAATGAGGACAACTACATCAGAACCTAAGGATGTGGCCTTTGTTGTTGATGGCTGGGCTCTTGAGATTGTGCTTAATCACTACAGGAAGGCTTTTACTGAATTGGCAATATTGTCAAGGACTGCTATATGTTGCCGTGTGACACCATCACAAAAAGCACAGCTTGTTGAGCTCTTAAAATCATGTGATTATAGAACACTGGCAATTGGTGATGGTGGAAACGATGTAAGGATGATACAGACAGCTGACATAGGTGTTGGCATTAGTGGGAGAGAAGGATTGCAAGCAGCAAGAGCAGCTGATTACAGTGTTGGAAGTGTCTCTGGAACCAGCCTTTTCAATTCTGTTAGCTTGATGGCCTATAATGTTTTCTACACTAGTGTTCCTGTTCTAGTCAGTGTGCTTGACAAAGATCTTAGTGAAGAAACTGTGATGCAGCatcctcaaattttattttattgccaAGCTGGGAGGCTTTTAAACCCTAGTACATTTGCCGGATGGTTTGGGCGATCTCTCTTCCATGCAATAGTTGTATTTGTGATAAGTATACATGCCTATGCTTCTGAGAAAAGTGAAATGGAGGAGGTTTCGATGGTTGCACTCTCTGGTTGTATATGGTTGCAGGCTTTTGTTGTTACAATGGAAACCAATTCTTTTACAATATTGCAACATCTTGCTATATGGGGTAACTTGGCTGCcttttatgtcatcaattgGATCTTCAGTGCCATTCCTTCGTCGGGGATGTATACAATTATGTTTCGGTTGTGCCAACAGCCATCATATTGGATAACAGTATTTCTTACAGTTGCAGCTGGGATGGGTCCAATTTTAGCCATCAAGTACTTCCGATATACATATAGACCAAGCAAAATAAATACCCTTCAGCAGGCTGAACGTCTAGGTGGACCAATTTTGTCTCTAGCCACAATTGATCCTCAGCCCAGATCCTTAGAGAAAGAGGTTTCTCCATTGTCAATAACACAACCCAAAAACAGAAATTCTGTGTATGAACCTCTTTTATCAGATTCTCCAAATTCCACCAGAAGGTCTTTTGGAGCAGGGGCGCCTTTTGATTTTTTTCAGTCGCCCTCAAGATTATCACTCTCTAGCAGTTACACAAGAAATTGCAAGGACAACTGA 3063 0.4009 MNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVSKGIKKLVRKLNFFPLSAPNIVHALRTEQQNCKRKTHRRIDLKIQAQDIHVGTIVWLRENDEVPCDLVLIGTSDPQGLCYIETSALDGETDLKTRVIPSACMGIDVELLHKIKARFSLVTSGVIECPGPDKDIRRFDANMRLFPPFIDNDMCPLTIKNTILQSCNETKLGMSRGIPEPKLTAMDAMIDKLTGAIFVFQIVVVIVLGIAGNVWKDTEAKKLWYVRYPTEGPWFELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDTETAIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFKRCCINGIFYGNENGDAVKDVELLNAVASGSPDVAQSQDEDALVNAATRLHMVFFNKNGNILEVKFNSSILNYEILETLEFTSDRKRMSVVVKDCQNGKILLLSKGADEAILPHARAGHQTRNFIEAVEQYAHMGLRTLCLAWRELKEDEYQEWSLMFKEANSTLVDREWRVAEVCQRIEHNLEVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTKDEVRRSLERVLLTMRTTTSEPKDVAFVVDGWALEIVLNHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQTADIGVGISGREGLQAARAADYSVGSVSGTSLFNSVSLMAYNVFYTSVPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVVFVISIHAYASEKSEMEEVSMVALSGCIWLQAFVVTMETNSFTILQHLAIWGNLAAFYVINWIFSAIPSSGMYTIMFRLCQQPSYWITVFLTVAAGMGPILAIKYFRYTYRPSKINTLQQAERLGGPILSLATIDPQPRSLEKEVSPLSITQPKNRNSVYEPLLSDSPNSTRRSFGAGAPFDFFQSPSRLSLSSSYTRNCKDN 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0665 1020 Gene3D - 42 226 - -
Sto12g0665 1020 ProSitePatterns E1-E2 ATPases phosphorylation site. 365 371 IPR018303 -
Sto12g0665 1020 Gene3D - 560 745 IPR023214 -
Sto12g0665 1020 Pfam Cation transport ATPase (P-type) 411 491 - -
Sto12g0665 1020 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 558 619 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto12g0665 1020 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 674 740 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto12g0665 1020 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 73 - -
Sto12g0665 1020 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 746 1019 - -
Sto12g0665 1020 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 105 745 - -
Sto12g0665 1020 PRINTS P-type cation-transporting ATPase superfamily signature 144 158 - -
Sto12g0665 1020 PRINTS P-type cation-transporting ATPase superfamily signature 363 377 - -
Sto12g0665 1020 PRINTS P-type cation-transporting ATPase superfamily signature 586 596 - -
Sto12g0665 1020 PRINTS P-type cation-transporting ATPase superfamily signature 708 727 - -
Sto12g0665 1020 SUPERFAMILY Calcium ATPase, transduction domain A 104 163 IPR008250 -
Sto12g0665 1020 Pfam Phospholipid-translocating P-type ATPase C-terminal 745 930 IPR032630 -
Sto12g0665 1020 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 929 IPR023298 -
Sto12g0665 1020 Gene3D - 389 542 IPR023299 GO:0000166
Sto12g0665 1020 SUPERFAMILY HAD-like 352 745 IPR036412 -
Sto12g0665 1020 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 369 576 IPR023299 GO:0000166
Sto12g0665 1020 SFLD C1.7: P-type atpase like 346 745 - -
Sto12g0665 1020 SFLD p-type atpase 346 745 IPR044492 -
Sto12g0665 1020 Pfam haloacid dehalogenase-like hydrolase 577 727 - -
Sto12g0665 1020 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 73 - -
Sto12g0665 1020 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 746 1019 - -
Sto12g0665 1020 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 105 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0665 Sto-Chr12 4200320 4210685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0665 1 1020 Primary Pumps ATPases AT5G44240 74.887 0.0 1679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0665 K01530 - gmx:100786505 1736.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0665 12 4200320 4210685 Sto12g0665 12 4200320 4210685 ECH