Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0652 ATGGGGTCTGGACCACACAGATTTGTTCACTTGTTTCTTCTGATGATACCCACGTGGCTTAGCTCTTCATTTTCTGATGCCTACAAATTCTACGTAGGAGGCAAAGATGGGTGGGTTGTGAAGCCTTCTGAAGAATACAATCACTGGGCTCAAAGAAATAGGTTTCAAATCAATGATACTCTCTACTTCAAGTACAAGAAAGggtctgattcggttttggtGGTGAAGAAGGAGAACTACGATTCATGCAATACCAAGAGTCCCATTCAAAAGATGGACGGCGGCGATTCATCTTTCACTTTCGATAGGTCGGGTCCCTTTTTCTTCATCAGTGGAAACGCTGGTAACTGCCAGAAGGGTCAGAAGCTAATCGTCGTCGTTTTGGCTGTCAGGCATCATAAGCCTCAGTCACCACCTCCGGTGGCTGCGCCGGGGCTGTCTCCGGCATCCGGGAGCCCACCAGCTGTCTCGCCGGGAAGTTGGTCGCCTGAGCCCAGTGAGGGCCCGTCGTCCACCGGGGATGTTGCTCCGGCACCTTCTCCGGGGAAGGATGGTTCGGGTTCGATGAGGTTTGGTGTGGGAGAGAGATCTTGTCCCTCCTACAATACTCAACATGTAGTGGACAAGGTTAAAGACGACGATGGGAAATTGAGATGGAAACGAGTTAAGGTGAAGCCTGAAGAACATGTCAAGGTTCCAATATTTCCTGAAACTGAAAGTGGAATATATGATCAGTATTTTGATGACTATGTTTCAAGGATTCTAACTGAAAGGACACCTAACAGCAAACCGCTGTGGGAAGTCCATGTGATCAAATATCCAACAACAAATGCTGCTGGAACCGTCATAATGAAGCTTCATCATGCACTTGGAGATGGGTACTCCCTCATGGGTGCTCTTCTTTCTTGTCTACACAGAGCTGATGATCCttctcttccattatcttttccTTCACGTCCTGAAAATTCTaccaaaaaaagtattttgaagAGGTTACCTTCTGCTATCTCCTCCTTTTTTGACTCCATTCCAGATTTTGGATGGAGCTTGATAAAGTCTGGAATGATGGAAGATGACATATCACCCATAAGGTCTGGCTTTGAAGGAACTGAGTCTCAGCCTTTTGCCTTATCAAACATATTATTCTCTCTTGATCGTTTCAAGGAAATCAAGTCAAAGCTAGGAGTGACAACAAATGATGTGATTACTGGGATGATCTCCTATGGGATTCGGCTATACATGCAAGAGATTGACTACGAGACAAGAATGGCAAATTCCACAGCAGTGGTCATGCTCAATACAAGAAAGATTGAAGGTTACCAATCAGTGAAGGATATGCTAAAACCTGATTCCAAAGGCCAGTGGGGGAATCGAATCTCTTTCTTACAAGTTTCTATACCTAAGCTAAGCCAAGACAGTATTTCCAACCCCCTTGAATTTGTCTGGAAAGCACACAAAATAATCAAGAGGAAGAGACATTCTTTCAGTGTTTTTCTCATTGGCTGGCTCTTGGATTTGGAGATGAAATTAAGAGGGCATGAGGCAGTAGCTAAACACATCTACACCACACTTGGAAATTGTAGCGTCGTTATCTCCAACTTAAACGGGCCAATAGAACGGATGGCTTTGGCAAATCATCCTGTTAAAGGCTTCTACTTCACAATGACTGGGGGACCTGAGAATGTGAACATTACAATTATGAGCTATATGAAAACACTGAGAGTTACCTTGAGAACACTAAAGGGATTCATAGATGAGCACAAGTTCAAGTGCTGCATACAGAATGCTTTTGAAGTCATTTATAAAGCAGCTATGGAAGAAACCCAGAAAAATCCAGAGTTAAACTAG 1848 0.428 MGSGPHRFVHLFLLMIPTWLSSSFSDAYKFYVGGKDGWVVKPSEEYNHWAQRNRFQINDTLYFKYKKGSDSVLVVKKENYDSCNTKSPIQKMDGGDSSFTFDRSGPFFFISGNAGNCQKGQKLIVVVLAVRHHKPQSPPPVAAPGLSPASGSPPAVSPGSWSPEPSEGPSSTGDVAPAPSPGKDGSGSMRFGVGERSCPSYNTQHVVDKVKDDDGKLRWKRVKVKPEEHVKVPIFPETESGIYDQYFDDYVSRILTERTPNSKPLWEVHVIKYPTTNAAGTVIMKLHHALGDGYSLMGALLSCLHRADDPSLPLSFPSRPENSTKKSILKRLPSAISSFFDSIPDFGWSLIKSGMMEDDISPIRSGFEGTESQPFALSNILFSLDRFKEIKSKLGVTTNDVITGMISYGIRLYMQEIDYETRMANSTAVVMLNTRKIEGYQSVKDMLKPDSKGQWGNRISFLQVSIPKLSQDSISNPLEFVWKAHKIIKRKRHSFSVFLIGWLLDLEMKLRGHEAVAKHIYTTLGNCSVVISNLNGPIERMALANHPVKGFYFTMTGGPENVNITIMSYMKTLRVTLRTLKGFIDEHKFKCCIQNAFEVIYKAAMEETQKNPELN 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0652 615 Gene3D - 27 131 IPR008972 -
Sto12g0652 615 PANTHER O-ACYLTRANSFERASE WSD1-LIKE PROTEIN 206 607 - -
Sto12g0652 615 Pfam Plastocyanin-like domain 38 121 IPR003245 GO:0009055
Sto12g0652 615 SUPERFAMILY Cupredoxins 27 128 IPR008972 -
Sto12g0652 615 MobiDBLite consensus disorder prediction 134 197 - -
Sto12g0652 615 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 206 607 IPR045034 GO:0008374|GO:0045017
Sto12g0652 615 CDD OsENODL1_like 28 128 IPR041846 -
Sto12g0652 615 Pfam WS/DGAT C-terminal domain 455 600 IPR009721 GO:0004144
Sto12g0652 615 ProSiteProfiles Phytocyanin domain profile. 28 129 IPR003245 GO:0009055
Sto12g0652 615 MobiDBLite consensus disorder prediction 153 169 - -
Sto12g0652 615 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 246 402 IPR004255 GO:0004144|GO:0045017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0652 Sto-Chr12 4132187 4141140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0652 7 178 Phytocyanin Superfamily AT4G28365 48.370 1.29e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0652 - - gmx:100816273 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0518 7 3829098 3832012 Sto12g0652 12 4132187 4141140 CCT
Sto12g0652 12 4132187 4141140 Sto12g0652 12 4132187 4141140 ECH