Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0649 ATGGCCATAAACTACATAAAGAAGCTGGAGGAAAAGGTGAAGAAGGGGCAAGAGAAGAAAGATAGGCTATTGGCGATGGGAAGGAAAAGAGTAGCATCATGTGATGTTGAAGCAGAAATGAGCCAAATAAGGTCACCAAAGATGGAGATTCGTGAAACCAATTCTTCACTTGAAATACTTCTCATCACTGGCTTGGACAATCACTTCATTTTCTACGAGCTTATTCGCATCCTTCACGAACACAACATTGACGTCCTCGCTGCCAATTCCTCACTTGCTGGACATTTAATGCATCACCTTCTCCATgcacagATAGAACCGTCGTCGTCTGAATTTGGAGGAAGAAGCAAAGTAAGCGAGAGACTGAAAAGGTTTGTGTACGGATCCGTAAGTGATCATGTGGAAATAATGCAGCAGCAGCAGGAGTTGTGGGATTTCGACAATATTGGCTGTACACTTATGGAAGACAAGGAAGAAAACGATGTTCCAAAACTAGTTCATCAGTTCTATTTTGTCAAGCTTTGGCCAGAAGACCCAGATTCAGTATCTAGAATCAGAAAGGCAGAGAGGGTGATTGAGGACATGAATCAAGAACATCTTCGAATCAGTGAAGAGataaaagagaaaatgTCTGAGAGAAACCTTTATGGGCTGAGAAACTCCAACTACTACTATTACTACGAGGGAATCAGAAGCAGTATGGGAAGTAAAGGGTTAATACTAAATGACTTGCATGCGGCTCTTGATGAATTGTGCTTCACAAAGAATGCACCCAGGAGAGTATCTAATAAGTTATGCTTCAAGGGAGAGCTTGATAATCATAAGTTGAATTTCATGATGCTTCATGGAAGCAAGAGTTTAGCAGAGGAGAAGAAGGTTCTTAGGGAAATAAACAAGAGTGAGCAGAGAGATGTTGCTTCATTTTCATCGCTAGATCGGCTTAGAAACACTCTCATGGATGATTACGCTTTGGGGCACAGAAGAGAAAGGTTGTCACTTAGGGACAAAGTTAGACATATTGAGAAAGAGTTCGAGTCCATAGACAAAGTTATATCTTCTTTGCAGAAGAAATTGGCAGGTACGTATCAGAAGAAGGCTGAAGCATACCAATCCATCCTTGAACTGAAGAAAGCTAATGATGGGGAGATTACCAACTATTACCAGTACTGTTCACTCATGAACAATGTCCATCAGCTAGCTGAAAAGAAAGACATAGCAGCCCTTGATGAATTGTCTTGTTCTGAGGTTAGCAAATTTATGTTGGAATGGAACAATAATACAGCCTTCAGAGAGGATTATGAGAAGAGGGTCCTTCAATCACTTGAGAGACGGCATTTAAGCAGAGATGGAAGGATGAGAAGCCATAAGTGA 1371 0.4063 MAINYIKKLEEKVKKGQEKKDRLLAMGRKRVASCDVEAEMSQIRSPKMEIRETNSSLEILLITGLDNHFIFYELIRILHEHNIDVLAANSSLAGHLMHHLLHAQIEPSSSEFGGRSKVSERLKRFVYGSVSDHVEIMQQQQELWDFDNIGCTLMEDKEENDVPKLVHQFYFVKLWPEDPDSVSRIRKAERVIEDMNQEHLRISEEIKEKMSERNLYGLRNSNYYYYYEGIRSSMGSKGLILNDLHAALDELCFTKNAPRRVSNKLCFKGELDNHKLNFMMLHGSKSLAEEKKVLREINKSEQRDVASFSSLDRLRNTLMDDYALGHRRERLSLRDKVRHIEKEFESIDKVISSLQKKLAGTYQKKAEAYQSILELKKANDGEITNYYQYCSLMNNVHQLAEKKDIAALDELSCSEVSKFMLEWNNNTAFREDYEKRVLQSLERRHLSRDGRMRSHK 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0649 456 Coils Coil 185 212 - -
Sto12g0649 456 Coils Coil 6 26 - -
Sto12g0649 456 PANTHER PUMP INTERACTOR, PUTATIVE-RELATED 331 454 - -
Sto12g0649 456 PANTHER PUMP INTERACTOR, PUTATIVE-RELATED 154 323 - -
Sto12g0649 456 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 331 454 - -
Sto12g0649 456 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 154 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0649 Sto-Chr12 4105971 4110727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0649 2 126 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 33.083 9.08e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0649 - - gsj:114375351 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0649 12 4105971 4110727 Sto12g0649 12 4105971 4110727 ECH