Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0645 ATGTCTTTCCCACccatctttctcttcttcttcatcctcatCCACCTTCTCCTTAGCTCTGCTTCAGCTACAGAGTTCGTCTACAACACCAACTTCAACTCAACTAATACCCTTCTTTCCGGCAACGCCTCCATTCAATCTTCTATTCTCACCCTTACCAACACCTCCTACTTCTCCATAGGCCGTGCTTTTTTCCCTTCCAAAATACCCACTAAACCCTCcaattcttcttctcctttacCTTTCTTTACCTCCTTCATTTTCTCCATTGCCCCTTCCCAAGATCTCCTCCCCGGCCACGGGTTCGTCTTCATTCTCTCACCTTCTGCCGGAACCACAGGAGTCAGCTCTTCTCAGCATCTGGGTTTCGTCAATTTCACCAATGATGGTAATCCTAACAACCATGTCTTTGGTATCGAATTTGATGTGTTTAAGAATCAAGAGTTTAATGATATCGATGATAATCATGTGGGTGTCGATGTGAATTCACTTACATCTATTGCTTCTCATGCTGCTGGGTTTTGGGATGGGAAAGACGATGAGGAGTTTGAGGACTTGAAGCTTAACGATAGGGTGAATTATCAAGTGTGGATTGATTATTTGGATTCTAGGATTAATGTAACATTGGCTCGTGTAGGACAAAAAAGGCCTCGCAGACCTTTGATTACTGAGCATGTTAATCTTTCTTCGGTTCTTTTGGATGAAATGTATGTGGGGTTCTGTGCAGCAACAGGGCAACTTGTGGAGAGTCATAAAATCTTGAGTTGGAGCTTTAGTAATTCCAATTTCTCGATTGGTGATGCTTTAGTGACTTCAAATTTGCCTTCATTTGTATTGCCTAAAGAATCTGTTGTGGAATCAACTGGTTTTATTGTAGGGATCACTGTAGGTGTTTTCTTTATTATTGTCAGTGCCATTGTGATATTTGTGCTTTTCTATAGAAGtaataaaagaaatgaggacGATGTTGAAGATTGGGAATTAGAGTATTGGCCGCACCGTATAGGGTATGAAGAGATTTATGCTGCCACTAAAGGATTTTCAGACCACAATGTGATTGGACTTGGAGGGAATGGGAAGGTGTATAGAGGGATTTTACAAGGAGTGGAAGTTGCAATAAAAAGATTCCCTTTTCAAAGTGAGCAAGGCATGAGAGAATTTTTGTCTGAGATTTCAAGTTTAGGCAGATTGAAGCACAGGAATGTGGTTCCATTGAGAGGCTGGTgtaagaaagagagaggaagtTTGATTTTAGTTTATGATTATATGCACAATGGAAGTTTAGACAAAAGGATATTTAATGTTGATAACAACCTAGTTTTGACATGGGAAGAAAGAATTAAGGTATTGAAGGATGTGGCTCATGGATTATTGTATTTGCATGAAGGTTGGGAAGTTAAGGTCTTACACAGAGACATCAAGGCAAGCAATGTATTACTCGATAAGGATATGAATGCCAGGTTGGGGGATTTCGGACTAGCTCGAATGTATCATCACGAGCAGCAGCCAGCTAGTGTAACGCAAGTGATTGGGACTGTTGGGTACATGGCGCCTGAACTAGTTCATGTGGGTAGAGCCTCAACTCATACAGATATTTTCAGTTTTGGGGTGTTAGTTTTAGAGGTTGTATGTGGGAGAAGACCAGCTGAACAAGATCAGCCAGGCTTGGTAGCTTGGGTATGGAGGCTAATGGAGAGAGGAGAATTATGTTGTGCTCTTGATGATCGTTTAAAGTGGAGAAGTGAATGTGAGACCACTGATGTTGAGAGGGTTCTTCATATTGGTTTGTTGTGTACACTCCGTGAGCCTCAAGCTAGGCCAACAATGAGACAAATTGTGAAGGTGCTGGAAGGGGAGAGTATGGATATGAGCTTGCTTGACAAAATAAACTCAGCAGCTAACACTTCTGCAATTCTTGGAACAACCTTCGGTTTTGAACACAAAGAAGCTGGGTTCCACAATACTACTGAATACTGA 1977 0.3996 MSFPPIFLFFFILIHLLLSSASATEFVYNTNFNSTNTLLSGNASIQSSILTLTNTSYFSIGRAFFPSKIPTKPSNSSSPLPFFTSFIFSIAPSQDLLPGHGFVFILSPSAGTTGVSSSQHLGFVNFTNDGNPNNHVFGIEFDVFKNQEFNDIDDNHVGVDVNSLTSIASHAAGFWDGKDDEEFEDLKLNDRVNYQVWIDYLDSRINVTLARVGQKRPRRPLITEHVNLSSVLLDEMYVGFCAATGQLVESHKILSWSFSNSNFSIGDALVTSNLPSFVLPKESVVESTGFIVGITVGVFFIIVSAIVIFVLFYRSNKRNEDDVEDWELEYWPHRIGYEEIYAATKGFSDHNVIGLGGNGKVYRGILQGVEVAIKRFPFQSEQGMREFLSEISSLGRLKHRNVVPLRGWCKKERGSLILVYDYMHNGSLDKRIFNVDNNLVLTWEERIKVLKDVAHGLLYLHEGWEVKVLHRDIKASNVLLDKDMNARLGDFGLARMYHHEQQPASVTQVIGTVGYMAPELVHVGRASTHTDIFSFGVLVLEVVCGRRPAEQDQPGLVAWVWRLMERGELCCALDDRLKWRSECETTDVERVLHIGLLCTLREPQARPTMRQIVKVLEGESMDMSLLDKINSAANTSAILGTTFGFEHKEAGFHNTTEY 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0645 658 Pfam Legume lectin domain 24 262 IPR001220 GO:0030246
Sto12g0645 658 ProSitePatterns Protein kinases ATP-binding region signature. 353 374 IPR017441 GO:0005524
Sto12g0645 658 Pfam Protein kinase domain 348 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0645 658 ProSiteProfiles Protein kinase domain profile. 347 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0645 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Sto12g0645 658 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 11 622 - -
Sto12g0645 658 SMART serkin_6 347 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0645 658 CDD STKc_IRAK 353 618 - -
Sto12g0645 658 SUPERFAMILY Protein kinase-like (PK-like) 322 617 IPR011009 -
Sto12g0645 658 PANTHER - 11 622 - -
Sto12g0645 658 CDD lectin_legume_LecRK_Arcelin_ConA 24 254 IPR001220 GO:0030246
Sto12g0645 658 Gene3D Phosphorylase Kinase; domain 1 311 422 - -
Sto12g0645 658 Gene3D - 22 271 - -
Sto12g0645 658 SUPERFAMILY Concanavalin A-like lectins/glucanases 10 261 IPR013320 -
Sto12g0645 658 Gene3D Transferase(Phosphotransferase) domain 1 423 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0645 Sto-Chr12 4076660 4079113 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0645 22 572 Receptor kinase-like Gene Family AT4G04960 58.750 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto12g0645 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0645 - - gmx:100807059 951.429