Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0644 AtgattctccttcttcttcaatcTGCAGCCACACTGAGCTTAGTGTCTGCAACTGAATTTGTCTATAACACCAACTTCAACTCTTCTAATATCTTCCTTTGTGGAAATTCCACTATCCAGTCCTCCATTCTGGTTCTCACTAACCAAAGTCTCTTCGCTATAAGCCGAGCTTTTTACCCTTCAAAAATACCCACTAAAGCACCTAACTTTTCTACTCTTCTTCCCTTTTCAACTTCCTTCATCTTCTCTATTGCCCCCATTAAGCATTTTCTCACTGGTCATGGCTTTGCTTTCATATTCTCAACTTCTAAGGGCTTAAACGGCACAACCTCATCTCAGTACATTGGCCTTTTGAATTTCACCAATCAAGGTAATCCTCACAACCATGTTTTTGGAGTCGAATTTGATATCAGGAAAAATGTAGAGTTCAATGACATAAACGACAATCATGTTGGTGTAGACATAAACTCTCTTACTTCCGTAGCTTCACATGATGCTGGTTATTGGGGTGGGAAAGATGATAAGGAATTTAAGCAATTGAAGTTAAACAATGGAGTAAACTATCAGGTATGGATTGAATTTATGGATTCAAGGCTTAATGTCACTATGGCTCGAGCAGGAACAAAAAGACCCAAAAAACCTCTGATCAGTACGAATGTTAATCTTTCTGAGGTTCTTTTGGATGAAATGTATGTTGGGTTTTGTGCATCAACAGGGCTATTGTTGGACACTACAAGAATCATGGCTTGGAGTTACAGTAATTCGAATTTTTCAATTGGTGATGCTTTGATCACAACCAATTTGCCTTCATTTGTGCATCAGAAAGGCTTGTTTTCTGGATCAAGAGCTCTTGTTATAGGCTTTATTATTGTTTGCATAGTAATCATAGGCTGTGTGTCTCTGGTGTGTTTCATTTTATGGAGTAGAATAGGCTTAAGAGAGGAAGAATATGAAGAGTGGGAGTTGGAGTACTGGCCCCATAGGATTAGTTACAATGAGATTGATGCAGCAACAAGTGGATTCTCAGAAGAGAATGTGATTGGGATTGGAGGGAATGGAAAAGTGTATAAAGGAGTTTTGCAGGGAGCAGAAGTTGCAGTTAAGAGAATCTCTCATGAAACAGAATCAGGAGTAAGAGAATTTTTAGCTGAAATTTCAAGCTTAGGCAGAATGAAACACAGAAACCTGGTTAACTTCAGAGGTTGGTGTAAAAGAGGAAAAGGTAGTTTGATATTAGTCTACGATTACATGGAGAATGGGAGTTTAGACAAATGGATTTTTCaaagtgaagaagaaagaaagatccTAACTTGGGAAGAGAGGATCCAAGTTCTAAAGAATGTGGCTTCTGGAATTCTATACCTGCATGAGGGTTGGGAAGTGAAGGTTTTGCATAGAGACATCAAATCAAGCAATGTGCTTCTTGATAAAGATATGAATGCAAAGTTGGGAGATTTTGGATTGGCTCGCATGCATGATCATCATGGACAAATAGCAACCACAACAAGAGTGATTGGCACTGTAGGTTACATAGCCCCTGAAGTGGTTCATGCAGGAAGAACATCAACTCAATCTGACGTGTATGGCTTCGGAATATTGGTTTTAGAAGTTGTTTGTGGGAGAAGACCTATTGAAGAAGGTAAGCCAGGGATGGTTGAGTGGCTAATGTCCCTAGTGGAGATTGGTGAGTTGTACTGTGCTCTTGATGAGAGGTTGAAGACCAATGGAGGATGTGTTATTGAGGAAGTGGAGAGAATGCTTCGTTTGGGTTTGCTTTGTGCAAATTCTGACCCCAACATCAGACCTACAATGAGGCAAGTGGTTAATCTGCTAGAGGATGAATTTGAAGGCAATGAGACAGAACAGAACAGTGCAGGAATGAGTTTGCTTGAGAAAGTAAAATCAGcagcattgtggtctgaatctTCTCTTATTTTTCCTGGCATAAGACACCCTACGTTTGAAGAAATTATGTTGTTCAGTTCTGTTTCTAAAACGTCTAAAGGTAGCTCATGCGCAATCTCAAATTCAGACACCATCCTTGAAGGGAGGTAG 2055 0.3854 MILLLLQSAATLSLVSATEFVYNTNFNSSNIFLCGNSTIQSSILVLTNQSLFAISRAFYPSKIPTKAPNFSTLLPFSTSFIFSIAPIKHFLTGHGFAFIFSTSKGLNGTTSSQYIGLLNFTNQGNPHNHVFGVEFDIRKNVEFNDINDNHVGVDINSLTSVASHDAGYWGGKDDKEFKQLKLNNGVNYQVWIEFMDSRLNVTMARAGTKRPKKPLISTNVNLSEVLLDEMYVGFCASTGLLLDTTRIMAWSYSNSNFSIGDALITTNLPSFVHQKGLFSGSRALVIGFIIVCIVIIGCVSLVCFILWSRIGLREEEYEEWELEYWPHRISYNEIDAATSGFSEENVIGIGGNGKVYKGVLQGAEVAVKRISHETESGVREFLAEISSLGRMKHRNLVNFRGWCKRGKGSLILVYDYMENGSLDKWIFQSEEERKILTWEERIQVLKNVASGILYLHEGWEVKVLHRDIKSSNVLLDKDMNAKLGDFGLARMHDHHGQIATTTRVIGTVGYIAPEVVHAGRTSTQSDVYGFGILVLEVVCGRRPIEEGKPGMVEWLMSLVEIGELYCALDERLKTNGGCVIEEVERMLRLGLLCANSDPNIRPTMRQVVNLLEDEFEGNETEQNSAGMSLLEKVKSAALWSESSLIFPGIRHPTFEEIMLFSSVSKTSKGSSCAISNSDTILEGR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0644 684 CDD STKc_IRAK 347 612 - -
Sto12g0644 684 ProSitePatterns Protein kinases ATP-binding region signature. 347 368 IPR017441 GO:0005524
Sto12g0644 684 Gene3D Transferase(Phosphotransferase) domain 1 417 627 - -
Sto12g0644 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 255 IPR013320 -
Sto12g0644 684 Gene3D - 16 264 - -
Sto12g0644 684 CDD lectin_legume_LecRK_Arcelin_ConA 18 255 IPR001220 GO:0030246
Sto12g0644 684 Gene3D Phosphorylase Kinase; domain 1 310 416 - -
Sto12g0644 684 Pfam Legume lectin domain 18 256 IPR001220 GO:0030246
Sto12g0644 684 SMART serkin_6 341 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0644 684 PANTHER LECTIN RECEPTOR KINASE 3 673 - -
Sto12g0644 684 Pfam Protein kinase domain 342 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0644 684 PANTHER - 3 673 - -
Sto12g0644 684 ProSiteProfiles Protein kinase domain profile. 341 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0644 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Sto12g0644 684 SUPERFAMILY Protein kinase-like (PK-like) 319 611 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0644 Sto-Chr12 4072136 4074190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0644 15 560 Receptor kinase-like Gene Family AT4G04960 59.239 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto12g0644 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0644 - - gmx:100804553 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0644 12 4072136 4074190 Sto12g0644 12 4072136 4074190 ECH