Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0643 ATGGGTTGCATATGTTCCAAAACTTCAGCTGTGGAAGACAACCTGGAAGATTTGACAAAGAAATTGTCAGCATCTAGCAGAAAGGGGTCGCAGCTGAGTAGTTCACGATTGAATTCCTCAAAAAGGGATGAGGGGGTTTGGGCCAAGGATAAGTTAGATGATATTGATGTGAAGATTtcattaattgaaaagaaaggcACTGAGTCATTGCGGTTGTATGATGATCACGTTGTGAAGAAGGAAATAGAGAAACCAGAATTAGTTGTGCTTAATAATCCTGGTATTGGAAGGGTTCCAAAGGCTGCAGAAGGAGAGCAAGTTGCAGCTGGATGGCCGGCTTGGCTTTCTTCTGTGGCAGGTGAAGCTATCAAGGGATGGATACCACGAAGTGCAAATACTTTTGAGAGGTTATGTAAAATTGGCCAAGGAACTTACAGTTCTGTTTATAAGGCACGTGATATTACTCACGAAAAGATTGTTGCTTTGAAGAGAGTTCGTTTTGATAATCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGAGAAATCCTTGTTCTTCGTAGACTCAACCATCCAAATATAATCAAGTTGGAGGGCTTGATAACATCTCAGACCTCTCGCAGCTTGTACCTTATTTTTGAGTATATGGAGCATGATCTTACTGGACTAGCATCATGTCCTGGCATTAAGTTTTCTGAACCTCAGATTAAATGCTACATGCAACAACTTCTTAGCGGATTGGATCATTGTCATAGCCGTGGCGTCCTCCACCGTGACATAAAGGGCTCAAATCTTCTCATTGACAATAATGGCATCTTAAAAATTGCAGATTTTGGTTTGGCAAGTTTTTTTGATCCCCATCATAGTGTTCCATTGACCAGTCGTGTTGTGACTCTCTGGTATAGACCACCAGAACTTTTACTTGGAGCATCTCATTATGGAGTTGCAGTAGATTTGTGGAGCACTGGTTGCATACTGGGGGAACTATATAATGGAAGGCCCATATTACCAGGAAAAACGGAGGTCGAGCAATTGCATAGGATTTTTAAGCTTTGCGGATCACCATCTGAGGAATATTGGCTTAAATTGCGGTTGCCACATTCAAAAGTATTCAGGCCTCCACACCATTATAGGCGATGTATTGGAGAAACATTTAAAGAATGTGCCACAGTTTCTGTGAAGCTTATAGAGACACTACTTTCTGTAGATCCTGCGAAACGAGGAACAGCAGCCAGTGCTCTAAAGAGTGAGTTCTTTACAACAGAGCCCCTTGCTTGTGATTCATCAAGTTTACCAAAATATCCTCCCAGCAAGGAAATGGATGCTAAATTTCGGGATGAAGAAAGTAAAAGGCAGGGAGCTGTTGGAGGAAGGGATCAGAAAGTTGGCTCAGGAGTTAGACAAGAAAAGGAACCCAGGGCACATCTTCCAGCAAAAGACCATGTTGACCCACGTATGTCAATGCAGCAAGGACAACGTCATTCTGGACTTTTGGTTTATCCACCACATAAGCAGGCAGACGTTAGAGAAATGGAAAATAATTTCAGTGGCCATATTTATAAGAGGCCTTCACATTCAGGCCCATTGGTTCAGGGTGGTGGTTGGGCAAAGGGAAGAAAGGATGCTGATGAAGGACCTCTTGGTTCGAGCAGAGTCAGCTTGTCAAAACTATCTAATTTAATGGCATCTAGGACTTTATTATCTGAAGATCAGGAGGAAAAACAAGTTCCCTTGCAGACTAGAAAAACAATTGAAGGAAGAAAATCGGTGGAGTCAACTAATGGATCTGAGTCAATAAGGCAGGATAGAAAACGTCAATCTCAAAGAATTGTGGATCTCTGTCAAATAGAAAATGGAAGAGCCCCCACTAAAGAATTAACTCcgGGAGGGCATGGGTCTAGGGAAAACAAGATCTATCTCTCTGGTCCATTACTGGCTTCTTCAAACAACATGGATCAGATGCTCAAAGAGCATGACAGAAAGATCCAGGAATTTTCAAGACGAGCACGAATCGACAAGTCAAGAGGTGACAAATTTCGTCCATGGCGAAAAATGGATAAAGCAAAAAGTGTCAGCATAATTAATTGCTACCTCCCTTCAAGGATGGTGTCTGAATTTGAGATTGCGCATGAGCTACCTTTAGACGTTTTAGAAACAGAACTGAACAACATAATTTCTTCAAACGTAGGGTGTCTTATGCCAGGAAAAATAAGAGAagattcagaccacaatgctgCTGATTTTACTTTCTCAAGCAAACTCATTCCTGCACTGTTCTGTTCTGTCTCATTGCCTTCAAATTCATCCTCTAGCAGATTAACCACTTGCCTCATTGTAGGTCTGATGTTGGGGTCAGAATTTGCACAAAGCAAACCCAAACGAAGCATTCTCTCCACTTCCTCAATAACACATCCTCCATTGGTCTTCAACCTCTCATCAAGAGCACAGTACAACTCACCAATCTCCACTAGGGACATTAGCCACTCAACCATCCCTGGCTTACCTTCTTCAATAGGTCTTCTCCCACAAACAACTTCTAAAACCAATATTCCGAAGCCATACACGTCAGATTGA 2571 0.4138 MGCICSKTSAVEDNLEDLTKKLSASSRKGSQLSSSRLNSSKRDEGVWAKDKLDDIDVKISLIEKKGTESLRLYDDHVVKKEIEKPELVVLNNPGIGRVPKAAEGEQVAAGWPAWLSSVAGEAIKGWIPRSANTFERLCKIGQGTYSSVYKARDITHEKIVALKRVRFDNLDPESVKFMAREILVLRRLNHPNIIKLEGLITSQTSRSLYLIFEYMEHDLTGLASCPGIKFSEPQIKCYMQQLLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPHHSVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILGELYNGRPILPGKTEVEQLHRIFKLCGSPSEEYWLKLRLPHSKVFRPPHHYRRCIGETFKECATVSVKLIETLLSVDPAKRGTAASALKSEFFTTEPLACDSSSLPKYPPSKEMDAKFRDEESKRQGAVGGRDQKVGSGVRQEKEPRAHLPAKDHVDPRMSMQQGQRHSGLLVYPPHKQADVREMENNFSGHIYKRPSHSGPLVQGGGWAKGRKDADEGPLGSSRVSLSKLSNLMASRTLLSEDQEEKQVPLQTRKTIEGRKSVESTNGSESIRQDRKRQSQRIVDLCQIENGRAPTKELTPGGHGSRENKIYLSGPLLASSNNMDQMLKEHDRKIQEFSRRARIDKSRGDKFRPWRKMDKAKSVSIINCYLPSRMVSEFEIAHELPLDVLETELNNIISSNVGCLMPGKIREDSDHNAADFTFSSKLIPALFCSVSLPSNSSSSRLTTCLIVGLMLGSEFAQSKPKRSILSTSSITHPPLVFNLSSRAQYNSPISTRDISHSTIPGLPSSIGLLPQTTSKTNIPKPYTSD 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0643 856 MobiDBLite consensus disorder prediction 425 475 - -
Sto12g0643 856 Gene3D Phosphorylase Kinase; domain 1 128 221 - -
Sto12g0643 856 SUPERFAMILY Protein kinase-like (PK-like) 128 423 IPR011009 -
Sto12g0643 856 Pfam Protein kinase domain 135 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0643 856 PANTHER CYCLIN-DEPENDENT KINASE 1 673 - -
Sto12g0643 856 CDD STKc_CDK9_like 134 418 - -
Sto12g0643 856 Gene3D Transferase(Phosphotransferase) domain 1 222 456 - -
Sto12g0643 856 MobiDBLite consensus disorder prediction 516 550 - -
Sto12g0643 856 MobiDBLite consensus disorder prediction 564 607 - -
Sto12g0643 856 MobiDBLite consensus disorder prediction 24 41 - -
Sto12g0643 856 PANTHER CELL DIVISION PROTEIN KINASE 1 673 - -
Sto12g0643 856 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0643 856 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0643 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Sto12g0643 856 MobiDBLite consensus disorder prediction 566 587 - -
Sto12g0643 856 MobiDBLite consensus disorder prediction 836 856 - -
Sto12g0643 856 MobiDBLite consensus disorder prediction 22 41 - -
Sto12g0643 856 MobiDBLite consensus disorder prediction 437 454 - -
Sto12g0643 856 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0643 Sto-Chr12 4066999 4072622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0643 126 525 Core Cell Cycle Gene Families AT5G10270 44.737 1.72e-109 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sto12g0643 Pkinase 2.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0643 - - gmx:100807590 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0524 7 3925864 3930611 Sto12g0643 12 4066999 4072622 CCT