Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0617 ATGGGGTGTTGTGTCTCAACAAGCAGCCGGAGTACGTGTAGTAGCAGGAGTAACGGCGACACGATCTCTCCATCATGTTTGGAAATAGGATTCTGTGgacaaaagaaaacaaggaGAACATTCTCTGATCATGTCATTGCTCTGCAGCATTTACCATCCGTGCCTAACCGAATTTTCACTAATGGAAAGAGCCGTACTTCTTGCATATTTACACAGCAAGGCCGAAAAGGTATCAATCAGGATGCCATGATTGTATGGGAAGACTTCATTTCTGATGATGCAATCTTTTGTGGTGTCTTTGATGGGCATGGTCCACATGGTCATGTTGTTGCACGCAATGTGAGGGATACCTTACCGGTAAAACTACTTTCATTTTTGCACTCTTGTGAATCAAAGAGAAACGGGTCAAGCAAAGCTTGTTTCAAAGGGAACAGTGATGATGGAGACTGTGAGAAAGAGTGCTCTACTGAGGATATACTGAATTCTGTATGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTAAAGTCTCATCCAAATTTGGACTGCTTTTGTAGTGGGAGCACAGCTGTCACTATAGTGAAGCAGGGTTCAAATCTATTCATGGGATATATTGGGGATTCGCGAGCAATCATGGGATCGAAGGATAGCAATGATTCCATGGTGGCCATTCAGTTAACTGTCGACTTGAAGCCTGATTTGCCAAGGGAAGCTGAAAGGATTAAACGGTGCAAGGGCAGAGTATTTGCCCTGCAAGATGAGCCTGAAGTGCCTAGAGTATGGTTGCCTTTTGACGATGCACCTGGATTAGCAATGGCTCGAGCATTTGGAGATTTCTGCTTGAAGGAGTATGGTGTCATTTCCATACCTGAATTTTCCCATCGGCTGCTTACAGACAAAGATCAGTTCATCGTTCTTGCCTCCGATGGGGTGTGGGATGTGTTAAGCAACGAAGAGGTGGTGGAGATAGTATCTTCAGCACCAACACGGTCATCAGCAGCGAGGATGGTGGTGGATTCGGCTGCTCGAGAGTGGAAGCTTAAATATCCAACATCGAAGATGGATGATTGTGCTGTTGTGTGCCTGTTCTTGGATGGGAAAATGGAGTCAGAGTCAGATTATGAAGAACAAGGGTTCTCTTCAGCTACCATACAGAGCAACTATTCAGGCAATCCAGCTGAATCAGATGATGGTCACAAGTCTGAGCCTTCTCTGCAACGCAACTTCACTGTGAGATCTTCAGAAGAAAATGAGAGTTGTGGAGTAATACCAGTTGATGTCCAAGATGGAACCACTTTGTCAGTTGAAGATCAAAACTGGTCTGGTTTGGAAGGTGTCACACGTGTAAACTCGCTGGTCCAGCTTCCTAGGTTCTCTGAGGAAAGGCCAAACCCTTGA 1410 0.4475 MGCCVSTSSRSTCSSRSNGDTISPSCLEIGFCGQKKTRRTFSDHVIALQHLPSVPNRIFTNGKSRTSCIFTQQGRKGINQDAMIVWEDFISDDAIFCGVFDGHGPHGHVVARNVRDTLPVKLLSFLHSCESKRNGSSKACFKGNSDDGDCEKECSTEDILNSVWREAFMKAYKAMDKELKSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARMVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMESESDYEEQGFSSATIQSNYSGNPAESDDGHKSEPSLQRNFTVRSSEENESCGVIPVDVQDGTTLSVEDQNWSGLEGVTRVNSLVQLPRFSEERPNP 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0617 469 MobiDBLite consensus disorder prediction 378 409 - -
Sto12g0617 469 Gene3D - 56 370 IPR036457 -
Sto12g0617 469 Pfam Protein phosphatase 2C 151 344 IPR001932 -
Sto12g0617 469 SMART PP2C_4 50 366 IPR001932 -
Sto12g0617 469 CDD PP2Cc 72 368 IPR001932 -
Sto12g0617 469 ProSiteProfiles PPM-type phosphatase domain profile. 66 368 IPR001932 -
Sto12g0617 469 MobiDBLite consensus disorder prediction 379 398 - -
Sto12g0617 469 PANTHER ALPHABET, ISOFORM E-RELATED 1 457 - -
Sto12g0617 469 SUPERFAMILY PP2C-like 57 370 IPR036457 -
Sto12g0617 469 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0617 Sto-Chr12 3904612 3906486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0617 1 467 PP2C-type Phosphatase Gene Family AT1G03590 68.710 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0617 - - gmx:100798340 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0617 12 3904612 3906486 Sto12g0617 12 3904612 3906486 ECH