Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0609 ATGGATGGGAAGAGATCTGCTTTAGAGTTCAAGAGAGCGAAGATCTATGGACAAGTTTTATTGGGATTTGTGTTGATCTGCACGATTCAGTTTTCGGAAGCAGACACTAATCCTACTGATGTTGCTgcaataaataatttgtatgCTGCTTTGGGCTTTCCTGTTCTTCCTGGGTGGGTTCCAAGTGGGGGAGACCCATGCGGACAAGGGTGGCAAGGCATTCAATGTAATGGCTCATTTATACAGAAAATAGTTCTGAATGGTGCAAACTTGGGAGGCGAACTGGGTGATAGCTTGGGAACGTTTGTTTCTATCAGAGCAATAGATCTAAGCAACAACCACATTGGGGGAAGCATTCCATCCAGTTTGCCAGTCTCCATGCTAAATTTTTTTCTTTCAGATAATCAGTTCACTGGAAGTATTCCAACCTCTTTGTCCACATTGACTGAACTAACAGACATGTCTCTTAACAATAATCAATTAACTGGAGAAATACCGGATGTCTTTCAATCACTTACAAAATTGATCAATCTAGATTTATCTAGCAATAATTTGAGTGGAGAATTGCCTCCATCAGCAGAGAATTTGTTAGCTCTGACTACCCTGCATTTGCAGAACAATCAACTTTCCGGGACCCTTGATGTTTTGCAAGACCTTTCACTGAAAGATTTGAATGTAGAGAACAACCAATTTAATGGACCAATACCTCAAAAGTTGCTAAGCATCCCAAATTTCAGAAAAGATGGAAATCCATTTAATATTAATGCTACTGTAGCTCCTGCCTCTCCACCTCGTTCTCCAGTGCCAGCACCACCTGGAACCCTGGTTTCTGGGGCACCAACTTCTGGACATGTACCTACTAAACAGGTCGATGGACCTACTGCATCAAAGGAATCAAGTTCTGGAAAATCAAAAAAGACCACAAGAAGGGTGGTTTGGATATCCATTGCGAGCGTATTAGGATTCGTTATTTTGTTATTGGCATGCATTCTCTTTGCACCAAGATGTAGAAGAAAGGAAAGGGATAGCAGAATTTCCAAGCAACATCAAATTGGTGCATATGGAGATGACAGGCAGAATACTAGAGATTACAGGGCTGTAGTACAACCACCCAAACCAAAGGGGGCTGTTCTGAGACCCAAAGAAGATCATCAAGCAGAGAGCAGGAGAGTGGGAGCTATGCCAAGGCCACGGGATGAGCAAGAGAAAGATGTGCAAAGAATGGGAACATTACCGAAGAAGGAGGATCACGAGATAGATATTAGTGCAATAGAAGTGACTGTTGAGCCAATCCCTTTCTCCCGAGGGACTACAGTCAGTCCTCCTAGAAAAAATCCAGTTCCTCCCATTTTTGCAAAATCTTTTACCATTGCATCCCTTCAGCAGTATACAAACAGCTTTTCTCAAGAAAACCTAATAGGAGGAGGCATGCTGGGGAGTGTCTATAGAGCAGAGCTTCCTAATGGGAAGCTACTTGCTGTGAAGAAACTGGACAAGAGAGTTTCCGATCAACAAAAGGATCACGAGTTTCTTGAATTGGTAAACAATATTGATACTATCAGGCATGCAAATATTGTCGAGCTTATCGGTTACTGTGTGGAGCATGGCCAAAGGCTTTTGATCTATGAGTACTGCAGTAATGGGTCACTGCAGGAGGCACTCCATTCAGATGATGAGTTCAAAACAAGACTATCATGGAATGCCCGTATTCGAATAGCACTTGGGGCAGCTAGAGCATTAGAGTATTTGCATGAGATCTGCCAGCCACCTGTTGTACACAGAAATTTCAAGTCTGCCAATATTCTCCTTGATGATGATCTATCTGTGCGTGTTTCTGATTGTGGTTTGGCTCCCTTGATAGCTTCTGGTTCCGTGAGTCAGCTTTCAGGACAGCTGCTAACAGCATACGGCTATGGAGCTCCAGAATTTGAGTCAGGAATTTACACATACCAGAGTGACGTGTACAGCTTTGGAGTGGTTATGTTAGAACTTTTGACTGGCCGACAGTCCTATGACAGGACTCGTGCACGAGGGGAGCAATTTCTAGTAAGATGGGCAATTCCCCAACTTCATGACATTGATGCATTATCAAGTATGGTTGATCCTTCTCTCGATGGAGATTACCCAGCCAAATCATTGTCAAACTTTGCAGACATTATTTCTCGATGTGTTCAGTCAGAGCCAGAATTTAGGCCACCAATGTCAGAGGTTGTTCAGTACTTACTAGATATGATAAGGAGGGAGTCTCACAGAAGTGGATCCAGTGAAGACTGA 2274 0.4283 MDGKRSALEFKRAKIYGQVLLGFVLICTIQFSEADTNPTDVAAINNLYAALGFPVLPGWVPSGGDPCGQGWQGIQCNGSFIQKIVLNGANLGGELGDSLGTFVSIRAIDLSNNHIGGSIPSSLPVSMLNFFLSDNQFTGSIPTSLSTLTELTDMSLNNNQLTGEIPDVFQSLTKLINLDLSSNNLSGELPPSAENLLALTTLHLQNNQLSGTLDVLQDLSLKDLNVENNQFNGPIPQKLLSIPNFRKDGNPFNINATVAPASPPRSPVPAPPGTLVSGAPTSGHVPTKQVDGPTASKESSSGKSKKTTRRVVWISIASVLGFVILLLACILFAPRCRRKERDSRISKQHQIGAYGDDRQNTRDYRAVVQPPKPKGAVLRPKEDHQAESRRVGAMPRPRDEQEKDVQRMGTLPKKEDHEIDISAIEVTVEPIPFSRGTTVSPPRKNPVPPIFAKSFTIASLQQYTNSFSQENLIGGGMLGSVYRAELPNGKLLAVKKLDKRVSDQQKDHEFLELVNNIDTIRHANIVELIGYCVEHGQRLLIYEYCSNGSLQEALHSDDEFKTRLSWNARIRIALGAARALEYLHEICQPPVVHRNFKSANILLDDDLSVRVSDCGLAPLIASGSVSQLSGQLLTAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRTRARGEQFLVRWAIPQLHDIDALSSMVDPSLDGDYPAKSLSNFADIISRCVQSEPEFRPPMSEVVQYLLDMIRRESHRSGSSED 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0609 757 MobiDBLite consensus disorder prediction 376 408 - -
Sto12g0609 757 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 416 756 - -
Sto12g0609 757 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 30 373 - -
Sto12g0609 757 MobiDBLite consensus disorder prediction 371 408 - -
Sto12g0609 757 Gene3D Ribonuclease Inhibitor 39 255 IPR032675 -
Sto12g0609 757 Pfam Leucine Rich Repeat 174 196 IPR001611 GO:0005515
Sto12g0609 757 MobiDBLite consensus disorder prediction 253 307 - -
Sto12g0609 757 SUPERFAMILY L domain-like 37 244 - -
Sto12g0609 757 ProSiteProfiles Protein kinase domain profile. 467 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0609 757 Gene3D Transferase(Phosphotransferase) domain 1 545 756 - -
Sto12g0609 757 PANTHER OS01G0253100 PROTEIN 416 756 IPR045271 GO:0004714|GO:0006468
Sto12g0609 757 PANTHER OS01G0253100 PROTEIN 30 373 IPR045271 GO:0004714|GO:0006468
Sto12g0609 757 Pfam Protein tyrosine and serine/threonine kinase 470 741 IPR001245 GO:0004672|GO:0006468
Sto12g0609 757 Gene3D Phosphorylase Kinase; domain 1 444 544 - -
Sto12g0609 757 SUPERFAMILY Protein kinase-like (PK-like) 441 741 IPR011009 -
Sto12g0609 757 MobiDBLite consensus disorder prediction 280 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0609 Sto-Chr12 3854914 3861950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0609 31 755 Strubbelig Receptor Gene Family AT4G03390 63.408 0.0 908
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Sto12g0609 PK_Tyr_Ser-Thr 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0609 - - gmx:100811490 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0576 7 4295373 4303220 Sto12g0609 12 3854914 3861950 CCT
Sto12g0609 12 3854914 3861950 Sto12g0609 12 3854914 3861950 ECH