Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0595 ATGACGATAGCGTCCATCTTCACCAAAGCTTCAAAGACTTTCCATAGCTACCCTTCTTACTCTAAGCTCCTTCTTCTATGCACTCTCagTGGTGGAGGTGTAGTGGCGTACGCAGAATTACAATCTGATTCTAGACCTCCTAGTGTTGACCCTAATGAGCCCAGGAGGAAGAGAGTAGTAGTTCTTGGAACAGGATGGGCTGGTACCAGTTTCCTTAAGGATCTGGATGCTTTAAAATATGATGTTCAGGTTGTTTCACCTCGAAATTACTTTGCATTTACTCCCTTATTACCAAGTGTCACTTGTGGGACAGTTGAAGCACGGAGCATTGTGGAGCCAGTTCGAAACATCATAAAAAAGAGAAGAGGAGAAATTAAATTTTGGGAAGCAGAATGTGTCAAGATTGATCCTGCGAACAAAAAGGTTTTTTGTCGATCCAGTGTTGATGCCAACTTAGTGGGAAGTGGCGACTTTTCTCTGGAATATGACTTTTTGGTTGTAGCAACTGGAGCACAAGTAAATACTTTTAATACGCCAGGTGTTAAGgagaactgtcattttttgaagGAGGTGGAGGATGCTCAAAGGATCAGAAAATCTGTGATAGATTGCTTTGAGAAGGCTATTCTTCCTAGTTTAACTGATGAAGAGCGACGGACGAATCTTCATTTTGTAGTTGTTGGAGGGGGTCCAACTGGTGTGGAATTTGCCGCAGAGCTGCATGATTACGTCCAAGAAGATTTAATCAAATTATATCCGACAGTTAAAGATATAGTGAAAATAACAGTGATCCAATCAGGAGATCATATATTGAACATGTTTGATGAAAGAATCAGTACATATGCTGAGAAGAAGTTTGGAAGAGATGGTATAGAAGTTCAAACAGGATGCCGAGTTGTCAAAGTCACTGATAAAGATATTACAATGAAGGTGAAATCAACAGGAGAGGTTTGCTTGGTACCCCATGGATTGATTGTGTGGTCCACTGGCATTGGGACTCTTCCAGTTGTGAGGGACTTCATGGAACAAATTGGTCAGGTTAATAGAAAAGTCCTACAGACTGATGAATGGTTAAGAGTGAGTGGATGCGAATCTGTGTATGCTATTGGTGACTGTGCTTCTATACATCAACGTAAAATCATGGATGACATCTCATCCATTTTCAAAGCTGCAGACAATGACAACTCTGGTACCTTAACTGTCAAAGAATTCCAGGATGTGGTGGATGACATCATCCTAAGATATCCCCAGTTGGAACTCTATTTAAAGAGCAAGCATATGCTTAGTGTGACTGATCTGTGGAAAGATCCACAAGGGGTAGACAGAGAGGAAATAGACATAGAAGGGTTTAAGCTGGCGCTTAGCCATGTGGATTCACAGATGAAGACTCTGCCGGCAACAGCACAGGTTGCTGCTCAACAGGGTGCCTACCTAGCTAGATGCTTTAACCGATTGGAATACTGTGAAGAGCATCCTGAAGGTCCTAAAAGATTTAGAGAATCTGGACGCCATGTATTCCGTCCCTTCCAGTATAGGCATCTTGGGCAATTTGCTCCTCTGGGTGGGAAGCAGGCTGCAGCTGAACTTCCTGGTGACTGGGTTTCCATGGGTCACAGCACTCAGTGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGGATGTTGGTAATCTCTGATTGGACAAGAAGATTCATCTTTGGGAGAGATTCAAGTCGTATTTAA 1737 0.4226 MTIASIFTKASKTFHSYPSYSKLLLLCTLSGGGVVAYAELQSDSRPPSVDPNEPRRKRVVVLGTGWAGTSFLKDLDALKYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRRGEIKFWEAECVKIDPANKKVFCRSSVDANLVGSGDFSLEYDFLVVATGAQVNTFNTPGVKENCHFLKEVEDAQRIRKSVIDCFEKAILPSLTDEERRTNLHFVVVGGGPTGVEFAAELHDYVQEDLIKLYPTVKDIVKITVIQSGDHILNMFDERISTYAEKKFGRDGIEVQTGCRVVKVTDKDITMKVKSTGEVCLVPHGLIVWSTGIGTLPVVRDFMEQIGQVNRKVLQTDEWLRVSGCESVYAIGDCASIHQRKIMDDISSIFKAADNDNSGTLTVKEFQDVVDDIILRYPQLELYLKSKHMLSVTDLWKDPQGVDREEIDIEGFKLALSHVDSQMKTLPATAQVAAQQGAYLARCFNRLEYCEEHPEGPKRFRESGRHVFRPFQYRHLGQFAPLGGKQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRMLVISDWTRRFIFGRDSSRI 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0595 578 SUPERFAMILY EF-hand 337 465 IPR011992 -
Sto12g0595 578 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL 53 578 - -
Sto12g0595 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 59 78 - -
Sto12g0595 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 162 180 - -
Sto12g0595 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 223 241 - -
Sto12g0595 578 SUPERFAMILY FAD/NAD(P)-binding domain 218 376 IPR036188 -
Sto12g0595 578 Pfam Pyridine nucleotide-disulphide oxidoreductase 57 379 IPR023753 GO:0016491
Sto12g0595 578 SUPERFAMILY FAD/NAD(P)-binding domain 56 275 IPR036188 -
Sto12g0595 578 ProSiteProfiles EF-hand calcium-binding domain profile. 379 414 IPR002048 GO:0005509
Sto12g0595 578 Gene3D - 439 577 - -
Sto12g0595 578 Gene3D - 47 398 - -
Sto12g0595 578 PANTHER NADH DEHYDROGENASE 53 578 IPR045024 GO:0003954|GO:0006116
Sto12g0595 578 ProSitePatterns EF-hand calcium-binding domain. 392 404 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0595 Sto-Chr12 3789722 3794454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0595 7 578 Chloroplast and Mitochondria Gene Families AT4G21490 65.799 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0595 K03885 - gmx:100793566 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0595 12 3789722 3794454 Sto12g0595 12 3789722 3794454 ECH