Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0594 ATGCGTTGGTCTTCTTTCTTTCGGACAGCCTCAAGGGCTTTTCATGAGAATCCCTCCTTGTCCAAGTGTCTTGTTGTATGCACCATGATCCCCTTCAATTATTGCAGTGGGGGAGGTCTATTGGCATATGCTGACGCAGCAGCAGAAAAGAACATGGAAGATAAGTGCCGGAAAAAGAAGGTGGTGGTACTAGGAACTGGTTGGGCAGGGACAACATTTCTTAGGAATTTGAAAAGCACTTCATTTGATGTGGAAGTGGTTTCACCTCGTAACTATTTTGCATTTACGCCTTTGCTCCCAAGTGTTACAATCGGCACTGTGGAAGCTAGGAGTGTTGTCGAACCAATTCGCAGTATCACCCGCAAGAAAAATATGGACATTCAATTCACGGAAGCTGAATGCTATAGGATCGATCCCAAGAATAACAAAGTGTACTGTCGTTCTAGTCAAGACAGAAACCTGGGTGGCAAACAAGAATTTTCCGTTGATTATGACTACCTCATAATAGCCATTGGAGCCCGTTCTAATACATTTAACACACCAGGCGTTGAGGAGTATACTCACTTCTTGAAGGAAGTGGAAGATGCTCAGAGAATCCGTCGAAAAGTGCTAGACCTTTTCGAAAGGGCAAGCCTTCCATGTGTATCtgaagaggagaagaagaaacttCTAAATTTTGTAGTAGTTGGTGGTGGTCCTACTGGTGTAGAGTTTGCCGCAGAGCTTCACGACTTTGTTCATGACGATCTGTCTAAATTATACCCTTCTATTAGAAAATACGTTAACATCACTCTGTTGGAAGCAGGGGATCATATTTTGAACATGTTTGACAAGAGGATTACTGAATTTGCTGAAAGAAAGTTCAGCAGAGAAGGTATTGATGTGAGACTTGGGTCAATGGTGGTGAAAGTAACAGACAAGGAAATCTGTACTAAAGAAAGAGGAAGTGGTAATGCTGTATCTCTACCTTATGGAATGGTGGTTTGGTCAACTGGTATTGGTCCTCGTCCTGAGCTTCTTCAATTTATGAAAGATGTTGGTCAGGGTAGTAGGCGTGCAATAAGTACTGATGAATGGTTAAGGGTGGAAGGATTTCACAACATATATGCACTAGGTGATTGTGCCACTATAAATCAGCGTAAAGTTATGGAAGATATAGCGGTGATATTCAGCAAGGCAGACAAGAACGGGGATGGGAAATTAGATGCTGAGGAATTTCATGAGGTGGTTGATGACATTATAGAGAGGTATCCACAAGTGGATCTTTATTTGAAGAAGAAGCAAATGAATAACATAATGGCCTTAATGCGTAAATCTGAGGACGTGTCTGGTATAGTGGACATTGAAACGTTCAAAGCTGGTCTTTCTGAGGTAGATTCTCAGATGAAAAATCTTCCTGCGACAGCTCAGGTAGCTGCTCAACAAGGTGTGTACCTTGCAAACTGCTTCAATCGGATGGAGCAGTGCGAGAGGTATCCTGAAGGGCCTCTCAAGTTCAGAGGAACAGGACGACACCGTTTTCGTGCGTTTAGGTACAAGCATTTGGGGCAATTTGCTCCTTTAGGAGGAGAGCAAACTGCAGCTCAGCTTCCGGGAGATTGGGTTTCAATTGGGCATAGTTCCCAGTGGCTTTGGTATTCGGTATATGCAAGCAAGCAAGTGAGCTGGCGTACCAGGTATTTGGTGGTCTCTGACTGGGGAAGGCGATTCATATTCGGCAGAGACTCAAGTCGAATCTGA 1740 0.4322 MRWSSFFRTASRAFHENPSLSKCLVVCTMIPFNYCSGGGLLAYADAAAEKNMEDKCRKKKVVVLGTGWAGTTFLRNLKSTSFDVEVVSPRNYFAFTPLLPSVTIGTVEARSVVEPIRSITRKKNMDIQFTEAECYRIDPKNNKVYCRSSQDRNLGGKQEFSVDYDYLIIAIGARSNTFNTPGVEEYTHFLKEVEDAQRIRRKVLDLFERASLPCVSEEEKKKLLNFVVVGGGPTGVEFAAELHDFVHDDLSKLYPSIRKYVNITLLEAGDHILNMFDKRITEFAERKFSREGIDVRLGSMVVKVTDKEICTKERGSGNAVSLPYGMVVWSTGIGPRPELLQFMKDVGQGSRRAISTDEWLRVEGFHNIYALGDCATINQRKVMEDIAVIFSKADKNGDGKLDAEEFHEVVDDIIERYPQVDLYLKKKQMNNIMALMRKSEDVSGIVDIETFKAGLSEVDSQMKNLPATAQVAAQQGVYLANCFNRMEQCERYPEGPLKFRGTGRHRFRAFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRYLVVSDWGRRFIFGRDSSRI 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0594 579 SUPERFAMILY FAD/NAD(P)-binding domain 58 277 IPR036188 -
Sto12g0594 579 SMART efh_1 385 413 IPR002048 GO:0005509
Sto12g0594 579 Gene3D - 433 565 - -
Sto12g0594 579 SUPERFAMILY FAD/NAD(P)-binding domain 225 378 IPR036188 -
Sto12g0594 579 Pfam EF hand 389 410 IPR002048 GO:0005509
Sto12g0594 579 Gene3D - 49 431 - -
Sto12g0594 579 SUPERFAMILY EF-hand 336 465 IPR011992 -
Sto12g0594 579 Pfam Pyridine nucleotide-disulphide oxidoreductase 59 384 IPR023753 GO:0016491
Sto12g0594 579 PANTHER NADH DEHYDROGENASE 5 579 IPR045024 GO:0003954|GO:0006116
Sto12g0594 579 ProSiteProfiles EF-hand calcium-binding domain profile. 381 416 IPR002048 GO:0005509
Sto12g0594 579 ProSitePatterns EF-hand calcium-binding domain. 394 406 IPR018247 -
Sto12g0594 579 PANTHER - 5 579 - -
Sto12g0594 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 61 80 - -
Sto12g0594 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 164 182 - -
Sto12g0594 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 225 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0594 Sto-Chr12 3785488 3788110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0594 1 579 Chloroplast and Mitochondria Gene Families AT4G21490 68.313 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0594 K03885 - gmx:100820044 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0594 12 3785488 3788110 Sto12g0594 12 3785488 3788110 ECH