Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0588 ATGAACGCCATGGCTGTACCCACCGATGTTAAGATCTTGAACCACTTTGAGGTGGCTCCGCCACCAGCTTCAGTTTCATCAACTACCCTTCCTCTGAGTTTCTTGGACATCCCATGGCTGAACTGCCTACCCATGGAACGCCTTTTCTTCTACCAACACCCTCATCCCACTCACCATTTCATCCAAACCATCCTTCCCACTCTCACACACTCACTCTCCCTCGCTCTTCGCCACTTCTTCCCCTTCGCTTCCCTTTTCATATCTACGCCTTGCCCTCACAAGCCTCACATCCTCTACGTCGACGCCCAATCCTCCGTCCCTCTCACCCTCGCCGAATCCTCCGCAGATTTCAACTACCTCATCGCAGACTACCCACGTCACGTAACGGATCTCCATCCCTTGATCCCGACGCTCCCCCCCGCGCGTGTGCTCGACGACGGCTCCCAAGCCTACCCTCTCATGGCCATTCAATTCACAGTGTTCCCAGGCTCCGGATTCAGCATCGGCGTGATCTTCCGCCACGTGGCCGCTGATGGGAAGTCCTTTCATCATTTCATGAAATCTTGGGCGTCTATTTGTAGGAACAGAGGAACGGAGGAGATGCAAGAAATCGACGCAGAGCCAATTCACGACCGAGTTTCAGTCCAAGACCCAGATGAGCTGGAGGAATTTTTTCTGAATTGGTGGTGGAATGTAGGGAAGAATCGCATGATGGAAGTCAAGTCTGACATTTTCATCAATAAGGTTCGGGCCACAATAGTATTGCGCAGAGCCCAGATCGAGAAGCTAAAGAATTGGGTATCAGAGTTAGCCAACACAACCAAGGTATCAAGTTTTGTGGCAACGTGCTCTTTGATATGGGTTTGCTTGCTTAAATCAGAAGAGAAGGAAGGtgatggagaagaagatgatgataagcCCTGCTGCTTCGTTTTTTCCGCAGACTGTCGAAATCGCTACGGATTGTCGATACCTGAGACATATTTTGGGAATTGTTTAGCGTTTTGCTATGTGGGGGTGAAGAGGAAGGTGGTGGTGGGGGAGTTTGGTTTGGGTGAGGCAGCGAAAGCTATTGGGAACAAAGTTAAGGAAATGGAGAGAGAGGGTTTGGGAGGTGCAAAGAAATGGGTGGAATATTGGAAAGAGATGGGATCGGGGCTTCATAAGGTGATAGTGGGAGCCTCACCCAGATTCAAAGTGTATGAAACTGATTTTGGGTGGGGGAAGGTGAAGAAGAGTGAAGTGGTTCACACTGATAAGCTTGGAATCATATCTCTGGCAGAGAGTAGAGATGAAGAAGGTGGAATTGAAATTGGCTTGTCACTTCCAAAGGATCAAATGGAACGTTTCAATGTTATCTTGAATAAATGCTTGGGATccatgtag 1386 0.4798 MNAMAVPTDVKILNHFEVAPPPASVSSTTLPLSFLDIPWLNCLPMERLFFYQHPHPTHHFIQTILPTLTHSLSLALRHFFPFASLFISTPCPHKPHILYVDAQSSVPLTLAESSADFNYLIADYPRHVTDLHPLIPTLPPARVLDDGSQAYPLMAIQFTVFPGSGFSIGVIFRHVAADGKSFHHFMKSWASICRNRGTEEMQEIDAEPIHDRVSVQDPDELEEFFLNWWWNVGKNRMMEVKSDIFINKVRATIVLRRAQIEKLKNWVSELANTTKVSSFVATCSLIWVCLLKSEEKEGDGEEDDDKPCCFVFSADCRNRYGLSIPETYFGNCLAFCYVGVKRKVVVGEFGLGEAAKAIGNKVKEMEREGLGGAKKWVEYWKEMGSGLHKVIVGASPRFKVYETDFGWGKVKKSEVVHTDKLGIISLAESRDEEGGIEIGLSLPKDQMERFNVILNKCLGSM 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0588 461 Gene3D - 246 459 IPR023213 -
Sto12g0588 461 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 10 458 - -
Sto12g0588 461 PANTHER - 10 458 - -
Sto12g0588 461 Pfam Transferase family 21 451 - -
Sto12g0588 461 Gene3D - 10 242 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0588 Sto-Chr12 3753069 3754454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0588 119 454 Monolignol Biosynthesis Gene Families AT5G48930 23.529 2.54e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0588 - - zju:107416945 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0588 12 3753069 3754454 Sto12g0588 12 3753069 3754454 ECH