Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0578 ATGGGTCTTCAGGCTTCTCGCAGTCTCTTGCTTTTCTCTAGCCGCCAAGATGATGAAAACAGAGTTTTCCTCTCTCTGACGTACAGGGGTGACGGTGGTGTCATTTTTGAGACTGGGAACATACAAAGAATGGAGACACTTATATTGGGAGCTTTACAATGGCGAATGCGTTCCATTACACCCTTCTCTTTCATTCCTTTCTTCCTTGCATTGTGTCAACCTCAAAGACCCTCCTTTCAGGCAGAGATTAAACTCTTGGAATTTAAGCCATCTATAATTGCTGCATCAGCCCTTCTCTCTGCTTCTCACGAATTGTTTCCCTTCCAGTATCCCAGTTTCTTCAATGCAATTACCGATTGTGCATATGAAAGTATACTCAAGTGCAATAATGTGATACAAGACATAGCCATGGAGGGGTACGAGTCTATCTTCGATTTAGTTTCAAGTTCAGAGACACCCATAATGTGTTTGGACCTTACTTTTCAGAGCTCAGAAAGCGAGAAAACCAACGGAACCACTGCCACTGCCATTACTCAGAGACAAGAGAATGACATGAAGGAGAAGGAAAATAACTATGTTATGTAA 585 0.4239 MGLQASRSLLLFSSRQDDENRVFLSLTYRGDGGVIFETGNIQRMETLILGALQWRMRSITPFSFIPFFLALCQPQRPSFQAEIKLLEFKPSIIAASALLSASHELFPFQYPSFFNAITDCAYESILKCNNVIQDIAMEGYESIFDLVSSSETPIMCLDLTFQSSESEKTNGTTATAITQRQENDMKEKENNYVM 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0578 194 Pfam Cyclin, C-terminal domain 82 136 IPR004367 -
Sto12g0578 194 Gene3D - 38 145 - -
Sto12g0578 194 PANTHER CYCLINS 24 186 IPR039361 -
Sto12g0578 194 SUPERFAMILY Cyclin-like 42 137 IPR036915 -
Sto12g0578 194 MobiDBLite consensus disorder prediction 168 194 - -
Sto12g0578 194 PANTHER CYCLIN-D6-1-RELATED 24 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0578 Sto-Chr12 3712944 3713857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0578 33 186 Core Cell Cycle Gene Families AT4G03270 39.548 3.25e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0578 K18812 - gmx:100799951 183.341