Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0576 ATGGTGAGAGGTGCTTACTATGACAAAAATGGAGTGAAGAAAGGTGCGTGGAGTAAGGAGGAGGATGAAAGATTAAGAGCATATGTTGAAAGATATGGCCATTCCAATTGGCGTCAACTCCCCAAACTTGCagGAAGAACAGACAACGAGGTCAAAAACCATTGGCATAGCCACCTAAAGAAGCGAGTAGAATTATGCAATTGCAATGATGAGCTCCAAATGAAGCCTACCTGTGAAATACAAACAACTCATGAAAACCCAATACCTCCTGCTAATGCACCCTCCTCCAATATTTCAGAAAACTCACACTTCAATAATCCCACACAAATATCCTACTCCTACTCTCAATGTGATGCCAATAGTGCATGGGATTTTTGGACACAACCATTTATCCCAGAAAATTCATTTAATCATCACCAACATAACTATCCCACACTCAACTATGCACCCAATGAATTTGACATGGACGaatatgtttcatactttcttTGA 492 0.3902 MVRGAYYDKNGVKKGAWSKEEDERLRAYVERYGHSNWRQLPKLAGRTDNEVKNHWHSHLKKRVELCNCNDELQMKPTCEIQTTHENPIPPANAPSSNISENSHFNNPTQISYSYSQCDANSAWDFWTQPFIPENSFNHHQHNYPTLNYAPNEFDMDEYVSYFL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0576 163 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 3 45 - -
Sto12g0576 163 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 42 133 - -
Sto12g0576 163 PANTHER MYB-RELATED PROTEIN MYB4 3 45 - -
Sto12g0576 163 PANTHER MYB-RELATED PROTEIN MYB4 42 133 - -
Sto12g0576 163 SMART sant 13 61 IPR001005 -
Sto12g0576 163 Gene3D - 12 64 - -
Sto12g0576 163 ProSiteProfiles Myb-like domain profile. 9 59 IPR001005 -
Sto12g0576 163 CDD SANT 16 59 IPR001005 -
Sto12g0576 163 Pfam Myb-like DNA-binding domain 14 59 IPR001005 -
Sto12g0576 163 SUPERFAMILY Homeodomain-like 9 63 IPR009057 -
Sto12g0576 163 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 63 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0576 Sto-Chr12 3702072 3703806 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0576 1 63 MYB Transcription Factor Family AT5G10280 31.897 8.76e-14 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto12g0576 Myb_DNA-binding 1.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0576 K09422 - qsu:111984716 93.2041