Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0567 ATGGACTTTGACCTTGAAAACCCTTTGGCCTACTTTCACCACCTTCACTCTCACCCTCCTTATTCTCTCTTTCTCATTGAATCTGACCACATTCCTTCCCAAACTTACTTCCACACTCTTCACTCCTCTCATTTCCACATCACTCTTAGAACACAAGTCATTTCTTTCATCTCTCAGtTGTCCTGCACCTTTGATCCACTCTTGTCCTACCTAGCTATCAACTATCTGGATCGCTTCCTTGCCAAACAAAGGATTTCGCAACCAAAGCCATGGGTCTTCAGGCTTCTCGCAGTCTCTTGCTTTTCTCTAGCCGCCAAGATGATGAAAACAGAGTTTTCTCTCTCTGACGTACAGTGTTTTTTGAAACAGGGTGACGGTGGTGTCATTTTTGAGACGGGAACAATACAAAGAATGGAGACACTTATATTGGGAGCTTTACAATGGCGAATGCGTTCCATTACACCCTTCTCTTTCATTCCTTTCTTCCTTGCATTGTTCAACCTCAAAGACCCTCCTTTCAGGCAGGTTCTGAAAGATCGAGCTACTGAAATCATATTCAGATCACAAAGAGAGATTAAACTCTTGGAATTTAAGCCATCTATAATTGCTGCATCAGCCCTTCTCTCTGCTTCTCACGAATTGTTTCCCTTCCAGTATCCCAGTTTCTTCAATGCAATTACCGATTGTGCATATGTAAATAAAGAAAGTATACTCAAGTGCAATAATGTGATACAAGACATAGCCATGGAGGGGTACGAGTCTATCTTCGATTTAGTTTCAAGTTCAGAGACACCCATAAATGTGTTGGACCTTACTTTTCAGAGCTCAGAAAGCGAGAAAACCAACGGAACCACTGCCACTGCCATTACTCAGAGACAAGAGAATGACATGAAGAGAAGGAAAATAACTAGTTATGGTAAGAATCACACGGTCCAAATTTCCCAGATTGAGCAATgctga 960 0.4167 MDFDLENPLAYFHHLHSHPPYSLFLIESDHIPSQTYFHTLHSSHFHITLRTQVISFISQLSCTFDPLLSYLAINYLDRFLAKQRISQPKPWVFRLLAVSCFSLAAKMMKTEFSLSDVQCFLKQGDGGVIFETGTIQRMETLILGALQWRMRSITPFSFIPFFLALFNLKDPPFRQVLKDRATEIIFRSQREIKLLEFKPSIIAASALLSASHELFPFQYPSFFNAITDCAYVNKESILKCNNVIQDIAMEGYESIFDLVSSSETPINVLDLTFQSSESEKTNGTTATAITQRQENDMKRRKITSYGKNHTVQISQIEQC 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0567 319 Pfam Cyclin, N-terminal domain 27 150 IPR006671 -
Sto12g0567 319 SUPERFAMILY Cyclin-like 135 249 IPR036915 -
Sto12g0567 319 SMART cyclin_7 51 144 IPR013763 -
Sto12g0567 319 SMART cyclin_7 157 246 IPR013763 -
Sto12g0567 319 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 305 - -
Sto12g0567 319 Gene3D - 33 151 - -
Sto12g0567 319 SMART Cyclin_C_2 153 277 IPR004367 -
Sto12g0567 319 Pfam Cyclin, C-terminal domain 153 248 IPR004367 -
Sto12g0567 319 PANTHER CYCLINS 5 305 IPR039361 -
Sto12g0567 319 CDD CYCLIN 49 143 IPR013763 -
Sto12g0567 319 Gene3D - 23 241 - -
Sto12g0567 319 SUPERFAMILY Cyclin-like 12 150 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0567 Sto-Chr12 3667093 3668496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0567 1 299 Core Cell Cycle Gene Families AT4G03270 45.223 2.94e-81 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0567 K18812 - gmx:100799951 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0610 7 4500258 4501661 Sto12g0567 12 3667093 3668496 CCT
Sto12g0567 12 3667093 3668496 Sto12g0567 12 3667093 3668496 ECH