Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0565 ATGGTGAGAGGTGCTTACTATGACAAAAATGGAGTGAAGAAAGGTGCGTGGAGTAAGGAGGAGGATGAAAGATTAAGAGCATATGTTGAAAGATATGGCCATTCCAATTGGCGTCAACTCCCCAAACTTGCagGAAGAACAGACAACGAGGTCAAAAACCATTGGCATAGCCACCTAAAGAAGCGAGTAGAATTATGCAATTGCAATGATGAGCTCCAAATGAAGCCTACCTGTGAAATACAAACAACTCATGAAAACCCAATACCTCCTGCTAATGCACCTCCTCCAATATTTCAGAAAACTCACACTTCAATAATCCCACACAAATATCCTACTCCTACTCTCAATATTGCGGATCAAATTAGAGCTTTAAAAAGATGGCTTAGCTTCAAGGAGTTTCAGAGAAGCACCAATTTCCTTTCTGGTTATTCCTGCACCAACTTTGCAATTTCATCTGCACACCAACTTTGA 471 0.4055 MVRGAYYDKNGVKKGAWSKEEDERLRAYVERYGHSNWRQLPKLAGRTDNEVKNHWHSHLKKRVELCNCNDELQMKPTCEIQTTHENPIPPANAPPPIFQKTHTSIIPHKYPTPTLNIADQIRALKRWLSFKEFQRSTNFLSGYSCTNFAISSAHQL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0565 156 PANTHER MYB-RELATED PROTEIN MYB4 42 82 - -
Sto12g0565 156 PANTHER MYB-RELATED PROTEIN MYB4 3 45 - -
Sto12g0565 156 Pfam Myb-like DNA-binding domain 14 59 IPR001005 -
Sto12g0565 156 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 42 82 - -
Sto12g0565 156 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 3 45 - -
Sto12g0565 156 SUPERFAMILY Homeodomain-like 9 63 IPR009057 -
Sto12g0565 156 SMART sant 13 61 IPR001005 -
Sto12g0565 156 ProSiteProfiles Myb-like domain profile. 9 59 IPR001005 -
Sto12g0565 156 CDD SANT 16 59 IPR001005 -
Sto12g0565 156 Gene3D - 12 64 - -
Sto12g0565 156 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 63 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0565 Sto-Chr12 3656243 3658617 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0565 1 63 MYB Transcription Factor Family AT5G10280 31.897 9.56e-14 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto12g0565 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0565 K09422 - ini:109155620 86.6557