Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0564 ATGAACTATCTGCGCCCAAATCTAAAACATGGCAACTACACTCCACAAGAAGAGCAAATCATCATCAAACTTCATCAACAATACGGGAATAAATGGTCATTGATAGCCGAAAAGCTACCTGGAAGAACCGACAATGATGTGAAAAACCATTGGCATAGCCAACTGAAGAGGACGTGGAAGCAGAGGAATATTAACTGTGAATGTGATGATGACTTGAGCTTCCAAGCACTGAACATAAAGGCAAGTCATCATGACTCATCATCAGAATCAGAATCTAAGATTTTGAAAGTTGTTGTGGATGACTTCCACAATAATATTCTAGAAAGTTCATCCTTGATGTGCACCCaaatgtccacctcagcatcaCCCCAACAAAACTCTGCTTCCTTCGCCTCTCTTGATGATGTAGAATCAAGCCTCAACACCCAACACCCTTCATGGCAACATAATAATAAGTTTCAACAATTTAGTGGCGACTTCTGGGCTGAACCTTTTATACCAGAAAATACTTTTACTCAATATTGCTATCACCGTCAAATTGGCACCGCCGCACAACACTTTTTTCATATGATGCTGCACACTTCAGAGTGGAGTCTACATAATAGTAAATGA 612 0.3873 MNYLRPNLKHGNYTPQEEQIIIKLHQQYGNKWSLIAEKLPGRTDNDVKNHWHSQLKRTWKQRNINCECDDDLSFQALNIKASHHDSSSESESKILKVVVDDFHNNILESSSLMCTQMSTSASPQQNSASFASLDDVESSLNTQHPSWQHNNKFQQFSGDFWAEPFIPENTFTQYCYHRQIGTAAQHFFHMMLHTSEWSLHNSK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0564 203 Pfam Myb-like DNA-binding domain 11 54 IPR001005 -
Sto12g0564 203 Gene3D - 12 58 - -
Sto12g0564 203 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 59 IPR017930 -
Sto12g0564 203 CDD SANT 12 52 IPR001005 -
Sto12g0564 203 PANTHER MYB TRANSCRIPTION FACTOR 1 176 - -
Sto12g0564 203 ProSiteProfiles Myb-like domain profile. 5 55 IPR001005 -
Sto12g0564 203 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 176 - -
Sto12g0564 203 SUPERFAMILY Homeodomain-like 1 67 IPR009057 -
Sto12g0564 203 SMART sant 9 57 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0564 Sto-Chr12 3651874 3652689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0564 1 65 MYB Transcription Factor Family AT1G35515 63.077 2.74e-25 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto12g0564 Myb_DNA-binding 2.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0564 K09422 - jre:108991956 138.272