Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0563 ATGGTGAGAACCCCTAGGTGCGACCAAAGCGGGCTGAAGAAAGGCACATGGACACCGGAAGAAGACAGGAAGTTGGTTGCTTATGTTACTAGACCAGACATCAAAAGAGGGGATTACACTCAACAAGAAGAACACACCATTATCACACTTCACCAAAAGCTCGGaaacagATGGTCTAAGATTGCAGCCCATTTGCCAGGAAGAACAGACAACGAAATAAAAAACCACTGGCACACCAACTTGAAGAAGCAGTTTCAAGTTGAACAAAATGGAGAAGCTCAAGTGTTAAAGGCAAAGACAAAGGATGTTGAAACCCAATTAGAGAAAAACGAAGATTCTACTGCTACTGAATTATCTGATAATGCTTCACAATGTGGTTCAGAACTAGCATCCAATAATAATTCCCAAATCTGGGATATCTTGTCAATGTGTTATGAAAATATGGCTGTGGAAGATTATGAGGAGATGGGTTTTGTGGATGCGCTATTCATTGAGCCTACCACTGAAAATTTTTGGACAGAACCGTATATGCTTGATGTTTCCCACCTCCCTAATCAATCATTCCCACCTCAATACTTTGATCATTCTCTTACCCATCCACAACTTTGGGATCATAATTTGTATGACGATACCTTCTTTTAA 642 0.4019 MVRTPRCDQSGLKKGTWTPEEDRKLVAYVTRPDIKRGDYTQQEEHTIITLHQKLGNRWSKIAAHLPGRTDNEIKNHWHTNLKKQFQVEQNGEAQVLKAKTKDVETQLEKNEDSTATELSDNASQCGSELASNNNSQIWDILSMCYENMAVEDYEEMGFVDALFIEPTTENFWTEPYMLDVSHLPNQSFPPQYFDHSLTHPQLWDHNLYDDTFF 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0563 213 MobiDBLite consensus disorder prediction 101 120 - -
Sto12g0563 213 ProSiteProfiles Myb-like domain profile. 31 81 IPR001005 -
Sto12g0563 213 MobiDBLite consensus disorder prediction 101 115 - -
Sto12g0563 213 SUPERFAMILY Homeodomain-like 30 87 IPR009057 -
Sto12g0563 213 CDD SANT 16 81 IPR001005 -
Sto12g0563 213 Gene3D - 38 116 - -
Sto12g0563 213 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 85 IPR017930 -
Sto12g0563 213 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 31 183 - -
Sto12g0563 213 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 31 - -
Sto12g0563 213 SMART sant 35 83 IPR001005 -
Sto12g0563 213 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 31 183 - -
Sto12g0563 213 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 31 - -
Sto12g0563 213 Pfam Myb-like DNA-binding domain 36 81 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0563 Sto-Chr12 3637756 3638867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0563 1 123 MYB Transcription Factor Family AT2G31180 42.857 7.68e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto12g0563 Myb_DNA-binding 1.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0563 K09422 - gmx:100778518 169.859