Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0559 ATGAAGATCATTTTTAACCCACCAAGCTTTTTTCTCTCTGTTCTCTTCCTCTGCTTCTCTTTTCACACCAACCCTTCTCTAGCACTTGAAACCATCTCTGCAAATCAATCTCTTTCTGGGGATCAAACTCTCATCTCTCCACATGGCGTCTTCGAATTGGGATTCTTCAAACCAGGTCAGAATTCCTCTAAATACTACATTGGCATCTGGTATAAGAAAGTCTCTCAACAGACCTTTGTTTGGGTAGCAAATAGAGACCATCCTGTCTCTGATAAGAACACTGCCAAATTACTCATATCCAACGGAAACTTAGTTCTTCTCGATGAATCTCAAACCCCAGTTTGGTCAACCAACTTGATTCCCACCGCCGCCTCAACTTCTGTAGTAGCTCTACTCCTAGATTCTGGGAATCTTGTCTTGCAGCACAGCACCAATTCCACAGAAAATTTATGGCAGAGTTTTGATTACCCAACTGACACTTGGCTTCCCGGTGGGAGACTCAAGCTCAACAAGAAGACAAAACAGCCTCAATATCTCACTTCTTGGAAGAACAGCGAGGATCCTGGGACGGGTTTCTTCTCTCTGGAGCTAGACCCCAAAGGAACCACCTCCTACTTAATTCTCTGGAACAAGTCTGAACAATACTGGACCAGTGGTCCTTGGAATGGCCAAATTTTCAGCTTGGTCCCTGAAATGAGGGCCAATTTCTTATACAATTTCACCTTTGTGTCCAACGACAATGACAGCTACTTCACGTATTCCATGTATAACACTTCTATCATATCTCGTTTCGTCATGGATGTCTCGGGGCAGATCAAGCAACTCTCCTGGTTGGACAACACCAAGCAGTGGAATCTATTTTGGTCTCAGCCTAGACGACAATGCGAGGTTTATGCTTTTTGTGGCTCCTTTGGGATCTGCACTGACAATTCCATGCCCTTCTGTAACTGCTTGACTGGGTTTAAGCCTAAGTCACAAGCTGATTGGGATCTGAATGATCAGTCAGGTGGGTGCGTGAGGAAAACCCAATTGCAATGTGAGAATCCTAGTCCTTCTAATAATAGAAAGGACAGGTTTTTGGCAATGCCAAACATGGCCTTGCCTAAATATGCACAGTCTGTGGGAGTAGGGAATGCAGGGGAATGTGAGTCATCCTGCTTGAACAATTGCTCTTGTTCTGCTTATGCTTATGACAGTAGTGGTTGTTCAGTTTGGAATGGGCCTTTATTAAATCTGCAGCAACATTCTCAAGATGATAGTAGTGGAGAAACATTGTATCTTAAACTTGCAGCTTCTGAGTTTTCTGATCCTACACATGAAAAGAGCAAAATTGTTGGTATTGTGGTGGGCTCCGCTTGTGGTGTTGGGATTCTCCTAGCAATTCTCCTTTTTGTGGTGGTCAGGAGAAGAAATGGAATAGTTGGAACAGGAAAATCTGTGGAGGGTTCATTGATGGCATTTGGGTATAGAGATTTACAAAATGCAACCAAGAATTTCTCAGAAAAACTAGGAGGAGGGGGTTTTGGTTCAGTTTTCAAAGGCACATTGCCAGATTCAAGTGTCATAGCAGTGAAGAAGCTTGAAAGCATAAGCCAAGGTGAGAAGCAGTTCAGATCAGAAGTGAGTACAATAGGTACAGTCCAACATGTCAATCTTGTCCGCCTACGTGGCTTCTGTTCTGAAGGCACCAGAAAGCTTCTTGTTTATGATTACATGCCAAACGGCTCTCTAGATTCCCATTTGTTTCAGGAAAAGAACTCCAAGAAATTGAGCTGGAAATTAAGGTACCAAATTGCTCTGGGAACAGCTAGAGGATTAAATTACCTTCATGAGAAGTGTAGAGACTGCATCATCCACTGTGACATAAAGCCAGAAAACATTCTCTTAGATTCTGAGTTCTGTCCAAAAGTTGCAGACTTTGGCCTAGCAAAGCTAGTTGGAAGAGATTTCAGTAGGGTGCTCACAACCATGAGAGGAACGAGGGGTTATCTAGCACCAGAGTGGATTTCTGGAGTGGCCATTACAGCAAAAGCTGATGTTTACAGCTATGGCATGATGCTTTTTGAGCTTGTATCAGGCAGGAGGAACTCAGAGCCATCAGAGAGTGGGAATGTGAAGTTCTTTCCCACTTGGGCTGCAAATGTAGTAGCCCAAGGAGGTGATGTCGTTCTCAACCTTCTAGATGCTACGTTGGAGGGAAATGCAGAGATTGAAGAGGTGATTAGGATAATAAAAATTGCTTCATGGTGTGTACAAGATGATGAGACTCACAGGCCATCCATGGGTCAAATAGTTCAAATACTTGAAGGAGTTTTAGATGTGAATATGCCTCCTATTCCAAGATCCCTTCAAGTATTTGTTGAGAACCAGGAGAGCATAGTTTTCTACACTGACTCAAGCTCTAATCAGAGTTCGCAGGCAAGAAGCAATGTCTCAACAGTCTCTTCTCAAGCCAAAAGCAACACCTCATCAGCAAGCTCCAAGTCATGCTAG 2493 0.4344 MKIIFNPPSFFLSVLFLCFSFHTNPSLALETISANQSLSGDQTLISPHGVFELGFFKPGQNSSKYYIGIWYKKVSQQTFVWVANRDHPVSDKNTAKLLISNGNLVLLDESQTPVWSTNLIPTAASTSVVALLLDSGNLVLQHSTNSTENLWQSFDYPTDTWLPGGRLKLNKKTKQPQYLTSWKNSEDPGTGFFSLELDPKGTTSYLILWNKSEQYWTSGPWNGQIFSLVPEMRANFLYNFTFVSNDNDSYFTYSMYNTSIISRFVMDVSGQIKQLSWLDNTKQWNLFWSQPRRQCEVYAFCGSFGICTDNSMPFCNCLTGFKPKSQADWDLNDQSGGCVRKTQLQCENPSPSNNRKDRFLAMPNMALPKYAQSVGVGNAGECESSCLNNCSCSAYAYDSSGCSVWNGPLLNLQQHSQDDSSGETLYLKLAASEFSDPTHEKSKIVGIVVGSACGVGILLAILLFVVVRRRNGIVGTGKSVEGSLMAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLPDSSVIAVKKLESISQGEKQFRSEVSTIGTVQHVNLVRLRGFCSEGTRKLLVYDYMPNGSLDSHLFQEKNSKKLSWKLRYQIALGTARGLNYLHEKCRDCIIHCDIKPENILLDSEFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNSEPSESGNVKFFPTWAANVVAQGGDVVLNLLDATLEGNAEIEEVIRIIKIASWCVQDDETHRPSMGQIVQILEGVLDVNMPPIPRSLQVFVENQESIVFYTDSSSNQSSQARSNVSTVSSQAKSNTSSASSKSC 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0559 830 SMART ntp_6 354 429 IPR003609 -
Sto12g0559 830 PIRSF SRK 2 821 IPR024171 GO:0004674
Sto12g0559 830 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 8 798 - -
Sto12g0559 830 Pfam PAN-like domain 353 411 IPR003609 -
Sto12g0559 830 Gene3D - 26 154 IPR036426 -
Sto12g0559 830 Gene3D Phosphorylase Kinase; domain 1 466 571 - -
Sto12g0559 830 ProSiteProfiles PAN/Apple domain profile. 346 430 IPR003609 -
Sto12g0559 830 SUPERFAMILY Protein kinase-like (PK-like) 482 801 IPR011009 -
Sto12g0559 830 SMART serkin_6 497 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0559 830 ProSiteProfiles Protein kinase domain profile. 497 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0559 830 ProSiteProfiles Bulb-type lectin domain profile. 29 153 IPR001480 -
Sto12g0559 830 Gene3D Transferase(Phosphotransferase) domain 1 572 777 - -
Sto12g0559 830 Pfam Protein kinase domain 500 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0559 830 Pfam D-mannose binding lectin 78 183 IPR001480 -
Sto12g0559 830 ProSitePatterns Protein kinases ATP-binding region signature. 503 526 IPR017441 GO:0005524
Sto12g0559 830 CDD B_lectin 35 157 IPR001480 -
Sto12g0559 830 MobiDBLite consensus disorder prediction 798 830 - -
Sto12g0559 830 CDD PAN_AP_plant 342 430 - -
Sto12g0559 830 Pfam S-locus glycoprotein domain 216 325 IPR000858 GO:0048544
Sto12g0559 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 222 IPR036426 -
Sto12g0559 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Sto12g0559 830 SMART blect_4 35 157 IPR001480 -
Sto12g0559 830 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 8 798 - -
Sto12g0559 830 CDD STKc_IRAK 503 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0559 Sto-Chr12 3611131 3613623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0559 451 778 Receptor kinase-like Gene Family AT5G20050 39.394 4.97e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sto12g0559 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0559 - - gmx:100782119 1236.09