Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0536 ATGCCAGACCCTTTGTTGCAGCCATTTGCATGCCCTGATGACATCGTGGTTGCATCTGAACCTCTAGAAGACCTACACATTGATGAAAGGGTTGAAGCTCTATTAGAGAGTTATGATATTACTCCTGGAATGGAGCTTGAAGCAATAAGAGAAGCTTTGCAAATGAattttgaatatgaaaaatGGGAGGAATCAGGAGTCTGTGAAGTTGAACAGGATATTTGCATTGTGCCCTTCTCTCAGTCATGTATGCTGTTTAGTACGTCGTTGCAGCTTTACAATGGACATGGTTTTCCTTGGCATGAGGCTTGCTTAAGCGAAGAGTGTAATTCAAAAACTAATCTAGTATCTAGAGATTCTGAGCCTCAATCAAGTATGTCTGCTGACAAGGATAATGGCTTTGCCTTTGGTGTCCCTGTTGACTGGTTTTCTGCCAGAGGGTCATGCAAAGGTGGTGACTGGAAGTGGATTAAGGATGTCCAAGATACATTTCTTAGAAAGAAACATGTTTTAAATGATGGATCTCCATTATGTCAAATGCCAAAGTCTGGGCGTGGTGATCCTCGCAGGCCTCGAAAAGATGACTTGTATAATTATCCTTCAGACAGCATGAGGCTTGATCTCCCTCTTTGGGCTTTTTGTGCTGATGAGGGGATAGATTGCAGTGCTATGAACAGATCAAGTCAAAGTAAGCCTGCTTTAGCTAGAAGAATACAAGGAAATACTCTTCCAGTGGTCAGGATAAATGCATGTGTGGTTAATGACCTGGGACCATTGGTCTCTGAGCCATGTCACAAAACCCGATGCAAGGATAGATGTCAACTCAGGACAACTCGGCCTGTCTCTATAACCAGTGATAACAGGAGGTCAACTGAAGTTTATTGTCAGTCAAAAGCTGTTAATAATCAAGGATTTCAAGGTTCTTGCAGGAGCATGGGATTTATTAAAATCCCCAAAGACGGTCTCTGTATTGTCCAGGACTTGCAGGTACATTTGGGTGACTGGTATTATCTTGATGGTTCTGGGTGTGAAAGAGGGCCGTCATCTTTTTCAGAGCTACAGGTTTTAGTAGAACAAGGAATTATAAAGAAGTACACTAGTGTTTACAGGAAATGTGATAAACCATGTGTTCCTGTTTCTTCTGCTTCAGAAAATTCCTATTTCAGTCTCAGGAACCACCAGGAAAGGACTTCAATATTGGGTGCATATCCTGGGTTCCCATTGTTGCAAACTCGAGGCATGTCATTCGGTGGTCCTCTGTCTAATTCCAGTTTGTTTCATAGCATACACCCTCAGTTTGTTAGGTACACTCGTGGGAAGCTGCATGAATTGGTAATGAAATCATATAAAAGCCGGGAGTTTGCTGCAGCTATAAATGAGGTTTTGGATCCCTGGATCAATGCAAAACAGCCAAAGCAAGAACTAGATAAACAAATACATAGGAAATCAGAAGTTGATTCACGGGCTTCCAAAAGATCTCGGGTATTGGTTGGTTATAGTGAAGAGAACAGTGAAATGGAAGATGGTGGCCTAACTATCCAGAAGAATGAATCCACTTTTGAGGATCTATGTGGTGATGATACTTTCTTGAGAAGAACTAGTGGTATTATTGATTCCAATATGGGAAGCTGGGGTTTATTGGACGACCATATGTTGGCACGAGTCTTTCATTTCTTGAGATCTGATTTGAAATCCCTTGCATTTGCTTCAATGACTTGTAAGCACTGGAGAGATGCGGTAAGGTTTTGTAAGGATGTTTCAAGACAGGTTAATTTGTCATCTTTTGGTCCTTCTTGCACTGATTCCGTGTTGTGGAATGTTATGAATGGTTATGAGAAAGACAAGATCAGATCAGTTATTCTAACTGGTTGCACCAATATTACTGCTGACATGCTTGAGAAGATTATTCTTTCATTTACTTGTCTATCTACAATAGACATTAGAGGTTGCAGCCAATTTAGACAGCTGACTCCAAAATTTTCCAATGTGAAATGGATCAAGAGCCAAAGTCTGCGCATAACCAAAATTGCAGAGGAGCCACATAAAATCGGGACCCTAAAGCGGATCAGTGAGCAAATTTCATCTTTTTCCCAAAACAATGGTCTAGGTACTATGGATGACTTTGGTGAACTGAAGGACTATTTTAATAGTGTGGATGAGAGAGACATGTCAAAGCAATTATTCCGTCAAAACTTGTACAAACGATCTAAACTGTATGATGCAAGAAGGTCCTCTTCCATTCTATCTAGGGATGCTCGCACTAGACAATGGGCCATCAAGAAATCTGATGGTTATAAGAGGATGGAGGAATTCCTTTCTTCAAGTCTGAGGGATATTATGAAGGCAAACTCCTGTGACATATTTGTGCCCAAGgTTGCAGAAATTGTGGCAAAAGTGAAAATTGGCTATTACAGTAGCCGTGGATTTAGCTCTCTCAAGGAGGACATCAGTAGAATGTGCCATGATGCAATAAAAGCAAAGAATCGTGGTGATGCTGGTGATATGAATCATATTGTAACATTATTCATTCAGCTTGTAACATGGTTGGAGAAAAGTTATAAAAAGTCTGCTCAAAACAGAGAGACACTATTCAAGTCATGGGAAAATGAATTTTCTGGTACTTTCTCAAAGTATAAGAAGAATAGATTAGTGACTGGGAGGAAGTATAGCAGTAATGGGACACAGGGTGGTTTGGATAATGGAGAGTATGCCTCTGAACGAGATCTTAGGAGACGCTTATCAAAGTTGAATAAGCAGTCAATGGGCTCTGAAAGTGAAACATCTGATGACCTTGATAGGTCTTCTAAAGATGGCAACAGTAACAGTGAGACTGCAACCTCAGACACTGATAGTGACAAAGAAATCCATTCAGGAAGCCGAATTGCAGAGTCAAAAGGTAATGAATACTTCATACCTAGTGAAGAGTTGGATTTCATAGCTGATGATCGTGAATGGGGTGCTCGCATGACAAAAGCAAGTATGGTTCCTCTTGTGACTCGGAAATATGAAGTCATTGGTCACTATGTCATTGTAGCTGATGAGGAGGATGTGCAAAGGAAGATGCAGGTTTCGTTGCCAGATGATTATCCAGAGAAGCTGAATGCTCAAAAGAATGGAACTGAGGAGTCAGACATGGAACTGCCTGAAGTCAAGGATTATAAACCTAGAAAACAGCTTGGGGATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCCTATACACACAATTTGTTACTTGATTCTATGCCAGAGGAGCTGGATTGGTCTCTTCAGGAGAAACACTTGTTTATAGAAGATAGCCTCCTCCGGACTTTGAATATGAAAGTTATCCATTTCAATGGAACTGGAAATGCTCCAATGAACTACCCTTTGCAACCTGTTATTGAAGAAATGAAAAACTGTGCTGAGGAGGACTGTGATGCAAGGATGGCTAGAATGTGTCATGGTATCCTAAAAGCCATAAACAGCCGTCAAGATGACAAATATGTTGCCTATAGAAAGGGTCTAGGTGTTGTTTGCAACAAAGAAGGTGGCTTTGATGAGGatgattttgttgtggagtTTCTGGGTGAGgtCTATCCTGTGTGGAAGTGGTTTGAAAAACAAGATGGGATTCGATCTCTGCAGAAAAATATTACAGATCCAGCTCCAGAATTCTATAACATATACCTGGAGAGGCCAAAGGGTGATGCTGGTGGGTACGACCTAGTTGTTGTTGATGCTATGCATAAGGCAAACTATGCTAGTCGAATATGTCATTCATGCCGACCTAATTGTGAAGCAAAAGTTACTGCTGTTGATGGTCGTTATTTGATTGGAATTTATACTGTTCGTAAAGTTCAACTTGGTGAGGAGATCACTTTTGATTATAATTCAGTCACGGAGAGCAAGGAGGAATATGAAGCATCAGTTTGTTTGTGTGGAAGCCAAGTTTGTCGAGGGAGCTATTTGAATCTGACTGGAGAAGGGGCTTTCCAAAAGGTACTGGAGGAGTGGCATGGAATTCTTGATTGTCACTATCTGATGCTAGAAGCTTGTGAGCTAAACTCAGTTTCTGAAGAGGATTATAATGACCTGGGAAGAGCTGGATTAGGCAGTTGTTTGCTTGGTGGCCTTCCAGATTGGCTAGTTGCATATACTGCTCGCCTTGTGAGATTCATTAATTTTGAAAGGACTAAACTTCCTGAGGAAATTTTAAGGCATAACTTGGAGGAAAAGAGAAAGTTTTTTTCAGATACATGTCTCGATCTTGAAGTAGAGAGGAGTGATGCCGAGGTTCAGGCTGAGGGTGTATACAACCAGAGGCTTCAGAATCTTGCTATCACTCTAGATAAGGTAAGATATGTCATGAGATCTGTTTATGGTGATCCACGGAGAGCACCACCCCCACTTGTGAAGCTGAGTCCTGAAGCTGCTGTTTCTTTCCTCTGGAAAGGAGAGGACTCATTTGTTGAAGAGCTTCTTCAGTGCATGGCTCCTCATGTGGAAGAAGACACCTTAAATGATCTCAAGTCCAAAATTCATGCCATTGATCCTTCAGGTTCTGGAGACATTCAAAAGGAGCTTCAGAAATCTCTATTATGGTTGAGGGACGAGGTCCGGAATCTTCCTTGTACATACAAATGCCGGCACGATGCTGCTGCTGACTTAATCCATATTTATGCTTATACCAAGTACTTCTTTAGAATACAGGGTTATGAAACCATTACATCTCCACCTGTGTATATTAGTCCACTTGACTTATGTCCTAAATACACTGACAAGTTGGGAGCAGGAGTTCAGGAGTATAGGAAGACGTATGgtgaaaattattgtttagggCAGCTTATTTTTTGGCATAATCAGAGTAATGCGGAGCCAGATTGTAGCCTGGCTAGAGCCAGCAGGGGTTGCTTGTCATTGCCTGACATTGGTTCCTTTTATGCTAAAGTGGAGAAGCCTTCAAGGCATCGTGTTAATGGGCCAAGGACTGTCAGATCTATGCTGGCAATAATGGAGAAGCAGCCCCACGGACCCTGGCCCAAGGACCGGATGTGGACATTCAAAAGTTCTCCAAATTTTTTTGGCAGCCCAATGTTAGATGCTGTAATATATAACTCTCCACTGGACAAGGAAATGGTTCAATGGCTGAAACACAGACCTGCCATATTCCAGGCCATGTGA 5166 0.4121 MPDPLLQPFACPDDIVVASEPLEDLHIDERVEALLESYDITPGMELEAIREALQMNFEYEKWEESGVCEVEQDICIVPFSQSCMLFSTSLQLYNGHGFPWHEACLSEECNSKTNLVSRDSEPQSSMSADKDNGFAFGVPVDWFSARGSCKGGDWKWIKDVQDTFLRKKHVLNDGSPLCQMPKSGRGDPRRPRKDDLYNYPSDSMRLDLPLWAFCADEGIDCSAMNRSSQSKPALARRIQGNTLPVVRINACVVNDLGPLVSEPCHKTRCKDRCQLRTTRPVSITSDNRRSTEVYCQSKAVNNQGFQGSCRSMGFIKIPKDGLCIVQDLQVHLGDWYYLDGSGCERGPSSFSELQVLVEQGIIKKYTSVYRKCDKPCVPVSSASENSYFSLRNHQERTSILGAYPGFPLLQTRGMSFGGPLSNSSLFHSIHPQFVRYTRGKLHELVMKSYKSREFAAAINEVLDPWINAKQPKQELDKQIHRKSEVDSRASKRSRVLVGYSEENSEMEDGGLTIQKNESTFEDLCGDDTFLRRTSGIIDSNMGSWGLLDDHMLARVFHFLRSDLKSLAFASMTCKHWRDAVRFCKDVSRQVNLSSFGPSCTDSVLWNVMNGYEKDKIRSVILTGCTNITADMLEKIILSFTCLSTIDIRGCSQFRQLTPKFSNVKWIKSQSLRITKIAEEPHKIGTLKRISEQISSFSQNNGLGTMDDFGELKDYFNSVDERDMSKQLFRQNLYKRSKLYDARRSSSILSRDARTRQWAIKKSDGYKRMEEFLSSSLRDIMKANSCDIFVPKVAEIVAKVKIGYYSSRGFSSLKEDISRMCHDAIKAKNRGDAGDMNHIVTLFIQLVTWLEKSYKKSAQNRETLFKSWENEFSGTFSKYKKNRLVTGRKYSSNGTQGGLDNGEYASERDLRRRLSKLNKQSMGSESETSDDLDRSSKDGNSNSETATSDTDSDKEIHSGSRIAESKGNEYFIPSEELDFIADDREWGARMTKASMVPLVTRKYEVIGHYVIVADEEDVQRKMQVSLPDDYPEKLNAQKNGTEESDMELPEVKDYKPRKQLGDEVIEQEVYGIDPYTHNLLLDSMPEELDWSLQEKHLFIEDSLLRTLNMKVIHFNGTGNAPMNYPLQPVIEEMKNCAEEDCDARMARMCHGILKAINSRQDDKYVAYRKGLGVVCNKEGGFDEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNITDPAPEFYNIYLERPKGDAGGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGRYLIGIYTVRKVQLGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLEEWHGILDCHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYTARLVRFINFERTKLPEEILRHNLEEKRKFFSDTCLDLEVERSDAEVQAEGVYNQRLQNLAITLDKVRYVMRSVYGDPRRAPPPLVKLSPEAAVSFLWKGEDSFVEELLQCMAPHVEEDTLNDLKSKIHAIDPSGSGDIQKELQKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFRIQGYETITSPPVYISPLDLCPKYTDKLGAGVQEYRKTYGENYCLGQLIFWHNQSNAEPDCSLARASRGCLSLPDIGSFYAKVEKPSRHRVNGPRTVRSMLAIMEKQPHGPWPKDRMWTFKSSPNFFGSPMLDAVIYNSPLDKEMVQWLKHRPAIFQAM 1721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0536 1721 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 93 1721 - -
Sto12g0536 1721 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 2 69 - -
Sto12g0536 1721 SUPERFAMILY F-box domain 542 601 IPR036047 GO:0005515
Sto12g0536 1721 SMART set_7 1158 1298 IPR001214 GO:0005515
Sto12g0536 1721 MobiDBLite consensus disorder prediction 947 961 - -
Sto12g0536 1721 MobiDBLite consensus disorder prediction 915 961 - -
Sto12g0536 1721 MobiDBLite consensus disorder prediction 175 196 - -
Sto12g0536 1721 Gene3D SET domain 1118 1323 IPR046341 -
Sto12g0536 1721 SUPERFAMILY SET domain 1166 1315 IPR046341 -
Sto12g0536 1721 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1303 1721 IPR045606 -
Sto12g0536 1721 CDD SET_SETD2-like 1166 1314 - -
Sto12g0536 1721 ProSiteProfiles SET domain profile. 1153 1292 IPR001214 GO:0005515
Sto12g0536 1721 Pfam SET domain 1233 1292 IPR001214 GO:0005515
Sto12g0536 1721 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 2 69 - -
Sto12g0536 1721 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 93 1721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0536 Sto-Chr12 3471890 3482567 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto12g0536 SET 6.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0536 K22748 - gmx:100781921 2541.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0536 12 3471890 3482567 Sto12g0536 12 3471890 3482567 ECH