Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0529 ATGGAAGCTGAGTGTGATCTTTGCGAGATTCGAAAAGCTGTTGTATACTGCAAGTCAGATTCTGCTCGTCTCTGCTTGCAGTGCGATGGTTATGTTCACACTCTCAGTGCTGCGTCACGCAGGCATCCTCGTTGGCTCCTGTGTGATAAGTGCAATTCCCAGCCAGCAGTTGCCCGCTGCATGTTTGATGAAATGTCTGTGTGTCAATCTTGTGACTGTAACCAAAAAGGCAGTTCAGTATTGGGACATAGGCATCAGGCATTGGGTTCTTATACGGGTTGTCCCTCTTCGGTTGAGTTCTCAAAGATATGGTCCTCTCTTATTGATGCTTCTTCTTCAGGTGGTCCTGATGTTTCTGGATGTGGGTCATCTAGCACATTGCCTAAAAATGACAGCTGCTCCAGCAAGTCCCTGGAGCAACCAGATAATGAGGGCTCATCTGTCAAATATGAGATGCCATCAAATCCAAATTACAAGTTGCCCTGTAGAGATCAACCTTTTTTCTTACCTCCGGACTCAGACATGTCTAAGGGATGTCCTAATTTCAAGGATCCTGGAATTATTTATGGTGATGATCTTTGTGAAGGTCTAAACATGGATGATATTCAATTAAACTTTGAAAGTGCCGATCAAATCATTGATTACCCTCAAGAAGCCACCAGATTCCATCTTGAGGATGGAGAAATTGACGGTCTATTGATGGAAAAGAACATAGCAGTGACAGAACCAAATAGTCTTATTGAGGATGCCTTGGTGATGGAGTTTCAGGCATCATCATCAGTTCAACGAGATTGTGTGGCCCTTCAATCATCCAGGGCTGTTGGGTCAGCTAATGTGGTGCAGTTCATCAACAACAATGCAAATAATGTATTTAGGAATCTCAGCTGCAACAAAAACATCAATATAGGATATCCTCAGGCTCAAGTTAATTCAAGTGTATCACTTTCATTACCAAACATTACTGGTGAAAATAGTGTCCCTGATTATCAAGTTTGTGGGTTACCACCGGCATTCTTGACAGGTGAAACCCGGTGGGGATCAAGCTTGGAGGCCAAATCCCCGCAAGCAAGGGATAAAGCTAAAATGAGATACaacgagaaaaagaaaaatcggaCGCAGGGAAAGAATCATCATGGACTTGGCACATTTCTTGATTGTAGGTTCGGTAAACAAATAAGATATGCATCTCGAAAGGCAAGAGCTGATACTAGAAAACGTGTGAAAGGTAGATTTGTTAAAGCTGTTGAAGCATATGATAATGATCCTGAAGTGACAGAGAACTTCTAA 1287 0.4204 MEAECDLCEIRKAVVYCKSDSARLCLQCDGYVHTLSAASRRHPRWLLCDKCNSQPAVARCMFDEMSVCQSCDCNQKGSSVLGHRHQALGSYTGCPSSVEFSKIWSSLIDASSSGGPDVSGCGSSSTLPKNDSCSSKSLEQPDNEGSSVKYEMPSNPNYKLPCRDQPFFLPPDSDMSKGCPNFKDPGIIYGDDLCEGLNMDDIQLNFESADQIIDYPQEATRFHLEDGEIDGLLMEKNIAVTEPNSLIEDALVMEFQASSSVQRDCVALQSSRAVGSANVVQFINNNANNVFRNLSCNKNINIGYPQAQVNSSVSLSLPNITGENSVPDYQVCGLPPAFLTGETRWGSSLEAKSPQARDKAKMRYNEKKKNRTQGKNHHGLGTFLDCRFGKQIRYASRKARADTRKRVKGRFVKAVEAYDNDPEVTENF 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0529 428 MobiDBLite consensus disorder prediction 119 149 - -
Sto12g0529 428 PANTHER CCT MOTIF FAMILY PROTEIN-RELATED 387 423 - -
Sto12g0529 428 PANTHER CCT MOTIF FAMILY PROTEIN-RELATED 3 377 - -
Sto12g0529 428 SMART bboxneu5 1 47 IPR000315 GO:0008270
Sto12g0529 428 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 387 423 - -
Sto12g0529 428 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 377 - -
Sto12g0529 428 CDD Bbox1_BBX-like 5 47 - -
Sto12g0529 428 ProSiteProfiles CCT domain profile. 372 414 IPR010402 GO:0005515
Sto12g0529 428 ProSiteProfiles Zinc finger B-box type profile. 1 44 IPR000315 GO:0008270
Sto12g0529 428 Pfam CCT motif 357 414 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0529 Sto-Chr12 3443107 3445295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0529 1 422 C2C2-CO-like Transcription Factor Family AT3G21880 37.900 1.20e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Sto12g0529 CCT 4.8e-11 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0529 - - gmx:100805778 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0529 12 3443107 3445295 Sto12g0529 12 3443107 3445295 ECH