Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0523 ATGAGAATGGGAAGGCAGAGTAATATTTACCTTGGGGCTTTGCTTGTTGGTCTCATAGCATTTACTGTATCAACTAAGGCTGAACTAAAACCAAATTATTATGGCAAGAGCTGTCCAAAAGCTGAGAAAATCATCTCCTCCTTTGTTCAACAACATATCAAAAATGCCCCACCATTGGCAGCTGCTCTCATTAGGATGCAGTTCCATGACTGCTTTGTCAGGGGCTGCGATGCATCATTGCTTCTCAACTCAACAACCAATCAAGCTGAGAGGAATGCTGCTCCAAACCTCACTCTCAGAGGCTTTGACTTCATTGATAGAATAAAGAGCTTAGTTGAAGCTGAATGCCCTGGAGTAGTCTCTTGTGCTGATATTATAGCTTTGTCTGCAAGAGACTCTATTGTTACCATTGGAGGTCCCTCCTGGACAGTTCTCACAGGTCGTAGGGATGGGACTGTTTCTAACTTAACAGAAGCCTTAACCAACATTCCAGCTCCATTTGACAACTTCACCACCCTCCAATCACGTTTTACCAACAAAGGACTTGATTTGAAAGACTTGGTCCTTCTCTCAGGTGCACACACAATTGGGATCTCCCATTGCCCATCATTCACAAACCGGCTGTATAACTTTACTGGTAAAGGTGATGAAGACCCATCTCTAGACAGTGAATATGCAGcaaatttgaaaaaattcaAGTGCAAGACTGCTAGTGATAATACCACACTTGTTGAGATGGACCCTGGAAGCCGCAAGGCATTTGATCTAAGCTACTATGCTCATTTGGTTAAGAGAAGGGGTCTGTTTGAATCAGATGCTGCATTGTTGACTAACTCATTTACAAAATCTGCCATCATCCAACTGCTTCAGGGTTCACTTGAGAATTTCTATTCTGAATTTGCCAAGTCTATGGAGAAATTGATTCAAGTCCAGGTCTTGACTGGGACACAAGGACAGATCAGGAAGCATTGTGCACTTGTAAATAGCTAA 990 0.4222 MRMGRQSNIYLGALLVGLIAFTVSTKAELKPNYYGKSCPKAEKIISSFVQQHIKNAPPLAAALIRMQFHDCFVRGCDASLLLNSTTNQAERNAAPNLTLRGFDFIDRIKSLVEAECPGVVSCADIIALSARDSIVTIGGPSWTVLTGRRDGTVSNLTEALTNIPAPFDNFTTLQSRFTNKGLDLKDLVLLSGAHTIGISHCPSFTNRLYNFTGKGDEDPSLDSEYAANLKKFKCKTASDNTTLVEMDPGSRKAFDLSYYAHLVKRRGLFESDAALLTNSFTKSAIIQLLQGSLENFYSEFAKSMEKLIQVQVLTGTQGQIRKHCALVNS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0523 329 PANTHER PEROXIDASE 25-RELATED 9 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 CDD secretory_peroxidase 28 327 IPR033905 GO:0004601|GO:0042744
Sto12g0523 329 Pfam Peroxidase 46 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 SUPERFAMILY Heme-dependent peroxidases 29 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Sto12g0523 329 Gene3D - 33 328 - -
Sto12g0523 329 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 PANTHER PEROXIDASE 9 328 - -
Sto12g0523 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Sto12g0523 329 ProSiteProfiles Plant heme peroxidase family profile. 28 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto12g0523 329 Gene3D Peroxidase, domain 2 164 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0523 Sto-Chr12 3414581 3415889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0523 14 329 Peroxidase AT1G05260 64.241 7.50e-157 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0523 K00430 - gmx:102660930 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0665 7 4863652 4870278 Sto12g0523 12 3414581 3415889 CCT
Sto12g0523 12 3414581 3415889 Sto12g0523 12 3414581 3415889 ECH