Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0520 ATGTCTGAATTCAATAAAGAAATCCCAACAACTTATGATCCCTTTGCTGAGGCTAATGCTGAGGATTCAGATGCTGGGACAAAAGATTATGTTCATGTGCGAGTACAACAGCGTAATGGTAGGAAAAGTCTAACAACTGTTCAAGGATTGAAGAAAGAGTATAGCTATAGCAAGATACTGAAAGACCTGAAGAAAGAGTTTTGCTGTAATGGTACTGTTGTTGAAGACCCTGAATTGGGCCAGGTCTGTACCTCTTGTGTTCTAAGTCATACAACTTCAGGGAGATCAAAGAAAGAACGTTTCCACATTCCTTGTGCAGGCTGGCATAGTGAAGAAGGAGCATATCAAGATTCATGGTTTCTAAGACCTAGGCAAGACCACAACAAATATCAGTATCTGATGTCTGATGATATGATTTGA 420 0.3976 MSEFNKEIPTTYDPFAEANAEDSDAGTKDYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVEDPELGQVCTSCVLSHTTSGRSKKERFHIPCAGWHSEEGAYQDSWFLRPRQDHNKYQYLMSDDMI 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0520 139 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 86 - -
Sto12g0520 139 SUPERFAMILY eIF1-like 7 81 IPR036877 GO:0003743|GO:0006413
Sto12g0520 139 Pfam Translation initiation factor SUI1 28 79 IPR001950 GO:0003743|GO:0006413
Sto12g0520 139 CDD eIF1_SUI1 29 82 IPR005874 GO:0003743
Sto12g0520 139 Gene3D - 2 84 - -
Sto12g0520 139 PANTHER BNAA09G12640D PROTEIN 8 86 - -
Sto12g0520 139 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 81 IPR001950 GO:0003743|GO:0006413
Sto12g0520 139 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0520 Sto-Chr12 3398766 3399897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0520 1 83 Eukaryotic Initiation Factors Gene Family AT4G27130 81.928 4.92e-49 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0520 K03113 - psom:113318732 156.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0520 12 3398766 3399897 Sto12g0520 12 3398766 3399897 ECH