Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0497 tTGATGAAGGCAGCCATAGGAGACGCAATCCTTACCTCAATATGGGTTTTCAGTGCCTCAACACTTCGAATCCTCACTTCCGAAGTGGCCTCCTTCCTCAACCTCCAACCCTCTTCACTCCCCGGACTCTTCATCACCACCCTCATCGCCACTCTCCTCGTCTTCACCATCAGCTTCATCGGCAGACTCCTCGGCGGCGCTAGCTTCAACCCCTCCACCACCGTCTCCTTCTACACCCTCGGCCTCCGACCTGACTCCTCTCTCACTTCCATGGCCCTACGCTTCCCGGCTCAGGCAGCGGGTGGGGTCGCCGGAGCTCAGGCCATCTTGCACGTGATCCCCACCCACTACAAACACATGATGAAAGGTCCTTCCTTGAAGGTGGATTTGCATAGTGGGGCTATAGCAGAGGGGGCTTTGACTTTTTCTCTGAATTTGTCCATTCTTTTTATTATGCTTAAAGGCCCTAAGAATCCTCTGCTCAAGGTGTATATGATTGCTGTGACTACGGTGGCTCTGGTTATTCCTGGTTCTCTCTATACTGGTCCTGCTATGAACCCTGCTAATGCCTATGGATGGGCTTATGTCAACAATAGGCATAACACTTGGGAGCACTTCTATGTTTACTGGATTTGCCCTTTCATTGGGGCCATTCTAGCTGCCTCTCTTTATCGCTTTCTCTTTATCTCACCACTCAAGCAGAAGAAAGCTTGA 714 0.5112 LMKAAIGDAILTSIWVFSASTLRILTSEVASFLNLQPSSLPGLFITTLIATLLVFTISFIGRLLGGASFNPSTTVSFYTLGLRPDSSLTSMALRFPAQAAGGVAGAQAILHVIPTHYKHMMKGPSLKVDLHSGAIAEGALTFSLNLSILFIMLKGPKNPLLKVYMIAVTTVALVIPGSLYTGPAMNPANAYGWAYVNNRHNTWEHFYVYWICPFIGAILAASLYRFLFISPLKQKKA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0497 237 Pfam Major intrinsic protein 2 224 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0497 237 PANTHER AQUAPORIN SIP1-1 2 237 IPR044222 GO:0015250
Sto12g0497 237 PRINTS Major intrinsic protein family signature 50 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0497 237 PRINTS Major intrinsic protein family signature 167 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0497 237 PRINTS Major intrinsic protein family signature 90 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0497 237 PRINTS Major intrinsic protein family signature 3 22 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0497 237 PRINTS Major intrinsic protein family signature 207 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0497 237 SUPERFAMILY Aquaporin-like 1 231 IPR023271 -
Sto12g0497 237 Gene3D Glycerol uptake facilitator protein. 1 235 IPR023271 -
Sto12g0497 237 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 2 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0497 Sto-Chr12 3259434 3260147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0497 1 228 Major Intrinsic Protein MIP AT3G04090 46.053 4.57e-62 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0497 K09875 - qsu:112031692 331.643