Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0481 ATGTTTAACGGTACGATGGATCCTGATATGATCAGAATTGCTCAGGAGCAGATAAGTCGCATGTCACCTGCCGAGTTGGCTCGGATCCAACAGCAGATGATGTCTAATCCAGAGTTAATGAGGATGGCCTCAGAAAGCATGAAGAACATGAGGCCTGAAGACTTCAAACTTGCTGCAGAACAGTTAAAGCATACCCGTCCAGAGCAGATGGCTGAGATTGGTGAGAAGATGGCTAATGCAACACCTGACGAAATAGCAGCTATGAGAGCCCGTGCTGATGCCCAAGTCAAATATGAGTTAAATGCAGCAGAGATGTTGAAGAAGCAGGGGAATGAACTTCACAGTCAGGGAAGGTTCCGTGATGCTATGCAGAAGTATTCTCTTGCTAAACAAAACATTAAAGAAATCCCATCTTCCCAAAGTAGAAAGCTTCTTTTGGCATGCTCACTCAACTTGATGTCTTGTTACTTGAAGACAAGGCAATATGAAGAATGCATAAAAGAAGGTTCTGAGGTTTTGGCATATGAAGCGAAGAATCTTAAAGCTCTTTATCGAAGAGGTCAAGCATACAAGGAACTGGGTCTACTGAAGGATGCTGTTAATGATTTGAGCATGGCATATGAAGTGTGCCCTGATGACGATACAGTTGCAGAGCTTTTAAGGGAGGCCAAGGAAATTCTGGCAAAGAAAGGAGGAGAGCATGCAACTAGAGGATTAGTAATTGAAGAAATAACTGAAGAAGTTGAGAACGTGCCTTCTGGAAACCTAGGAAGCTCATCTGCGGAGCAAACAGTGTCTCAACCAAAAAAATCCAATGACTCTTCTAAGAGCTGCAGTACAGTCAACAATGGAAATTCCAAAACAACAATGGAAAATTTAGATACATTTAAAAATGACCCAGAAGCTATCAGAATCAATTCAAGACGTAATTTGCTGCCTTATGCAGTCAATCTTTCAGGTAGTGAGAGTGAGCTGGTTGAACTAGACAGCTTACCTTTCAGTGCAATTAGTAATGGATTGTCTATGGAACCAATTGgtattcttttcattttagcaATTTCTTCTGGCCCCAACCTTAGGtcattccaaaatttcatgTCCAATGCTGATCCTGCTACTCTGGCTTCTTTGAATGCCGGGCAATCTAGAGATGTGTCTCCTGATATGATTAAAACTGCTTCAAATATGATTAGCAAGATGTCACCTGATGAACTCCAAAAAATGTTTGACATGGCTTCTTCATTTCAGGGGGACAACCCATTTTTAAGAGGAGGTTCCCCTGATTCTACTTTCAACCCTGGATCAATTCCTCCGAATGTGACCCCCGACATGATTAAAACAGCTTCAAATATGATCGGTAAAATGCCACCAGAGGATCTTCAGAAGATGTTTGAAATGGCATCCTCATTACAACGGGAAGCATCTATTCCATCATCCGCAGCTGTAGACAAGAATGTGAGAAAGGCTTCTCAGTCAGACATCCCCTCTTCAAGTGCTGTTGGAAGTAGTACTCTTGGTGAATCTAGTTCTTCTCGTGATTCatttttaaatatgagaaaTGCTTCTCAGTCAAACTTCCCATCCTCAAGCACCGATTTGCAAGAACAGATGAGAAACCAGATGAAAGATCCAGCTATGCGGcagATGTTCACATCAATGATGAAAAATATGAGCCCCGAAATGATGGCAAACATGGGTGAACAATTTGGTTTCAAACTTTCAAAAGAAGAGGCAGAAAAAGCTCAGCAAGCCATGTCATCCTTGTCGCCAGAGGATTTGGATAAAATGCTTCACACCTTCGGTGTGTGTTCATTGGTACTTGTTTCAAGGTTTTTGATTGGAttggtttatggtctaagATGCGATGGGCAGATAGGATCCAAAGAGGAGTCGAAGGTGCAAAAAAGACAAAGAACTGGCTGCTAG 1926 0.4081 MFNGTMDPDMIRIAQEQISRMSPAELARIQQQMMSNPELMRMASESMKNMRPEDFKLAAEQLKHTRPEQMAEIGEKMANATPDEIAAMRARADAQVKYELNAAEMLKKQGNELHSQGRFRDAMQKYSLAKQNIKEIPSSQSRKLLLACSLNLMSCYLKTRQYEECIKEGSEVLAYEAKNLKALYRRGQAYKELGLLKDAVNDLSMAYEVCPDDDTVAELLREAKEILAKKGGEHATRGLVIEEITEEVENVPSGNLGSSSAEQTVSQPKKSNDSSKSCSTVNNGNSKTTMENLDTFKNDPEAIRINSRRNLLPYAVNLSGSESELVELDSLPFSAISNGLSMEPIGILFILAISSGPNLRSFQNFMSNADPATLASLNAGQSRDVSPDMIKTASNMISKMSPDELQKMFDMASSFQGDNPFLRGGSPDSTFNPGSIPPNVTPDMIKTASNMIGKMPPEDLQKMFEMASSLQREASIPSSAAVDKNVRKASQSDIPSSSAVGSSTLGESSSSRDSFLNMRNASQSNFPSSSTDLQEQMRNQMKDPAMRQMFTSMMKNMSPEMMANMGEQFGFKLSKEEAEKAQQAMSSLSPEDLDKMLHTFGVCSLVLVSRFLIGLVYGLRCDGQIGSKEESKVQKRQRTGC 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0481 641 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 59 305 - -
Sto12g0481 641 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 359 599 - -
Sto12g0481 641 MobiDBLite consensus disorder prediction 251 293 - -
Sto12g0481 641 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Sto12g0481 641 PANTHER OUTER ENVELOPE PROTEIN 61 59 305 - -
Sto12g0481 641 PANTHER OUTER ENVELOPE PROTEIN 61 359 599 - -
Sto12g0481 641 Gene3D Tetratricopeptide repeat domain 89 235 IPR011990 GO:0005515
Sto12g0481 641 MobiDBLite consensus disorder prediction 469 513 - -
Sto12g0481 641 SMART tpr_5 103 136 IPR019734 GO:0005515
Sto12g0481 641 SMART tpr_5 180 213 IPR019734 GO:0005515
Sto12g0481 641 SMART tpr_5 146 179 IPR019734 GO:0005515
Sto12g0481 641 MobiDBLite consensus disorder prediction 471 513 - -
Sto12g0481 641 SUPERFAMILY TPR-like 96 226 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0481 Sto-Chr12 3157397 3162728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0481 100 225 Calmodulin-binding Proteins AT5G48570 33.333 6.65e-13 69.7