Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0474 ATGGGTATTGGCAGGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCAGATATAAGCCACAGGGAGGCTTTTAGTACAGCAGCCAAAAATGTAAGCTTAATTAACTGcgcctttaattaa 120 0.3667 MGIGREEIQRIKASNPDISHREAFSTAAKNVSLINCAFN 39
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0474 39 PANTHER PROTEIN YABBY 6-RELATED 5 32 IPR006780 GO:0007275
Sto12g0474 39 Pfam YABBY protein 5 31 IPR006780 GO:0007275
Sto12g0474 39 PANTHER AXIAL REGULATOR YABBY 2-RELATED 5 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0474 Sto-Chr12 3114062 3116159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0474 5 30 C2C2-YABBY Transcription Factor Family AT2G26580 92.308 2.58e-11 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Sto12g0474 YABBY 6.1e-14 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0474 K25796 - zju:107405020 55.4546