Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0471 ATGTTACAATCATACTGGAAATTTAAACTTAAGGACCTAAGGTTTCAACTTTCACGGCTCTATGTCTTTTTAACTTGTACAAGCCCTGAATTCAGGTTTCAAGATGGTGGTGTTTCTTTGGTAAAAGAAGTAAAAGATTTTAATCGAGTAAATGACATTTTCCACAGTGAAGTGCAACTCTTGGGGCATTTGCATCATCGCCATCTTCTTGCACTCAAAGGGTTCTCCATGGGATATAAGAGATTACTTATCTTTGACAACATAGAAAATGGAAGCTTGAAGGAGCATCTCAATGATCCCCTAAAGACTCCCTTGAGTTGGAGGATGAGGTTACAAATAGCTGTTGGTGTAGTAGCTGCACTGGAATACCTGTTTCTTTTCATTGAACCACCAAGATGTCATGTCTCCATCAGTTCAAGCAATATTATGTTAGATGAGAACTTCACGGCTAAACTATCTGACTATGGCCTTCTTACTTGTATTGGAAATTCTGCACCATATTCAAAAGATTGCACGGGACAGAAAAATGGTAACATAGTGTTCCAACTTGGAGTGCTCATACTGGAGCTTATCACTGGTCAATCTTCAGAGATGGAAGATCCAGATCTTGGAAACAGTTACGATTCTAAGGAGCTGAAAAGTCTCCTAGCTGTTGCAAAATTATGTATCAAATCAAGGGGCAAGCCTGCATTTACAATCCCGCAATTATTTCGGTATCTTCAGAAGAAGTTTGTTTCTAGAACTTCTTCCTACGGCATCATATCTGCCTTGGGATTGGAAGAAGCTGTAATTGGATCTCATTGTGCTGAGTCGCACACTGTACTCTCTGAGCACCACCAGGCATATCCTCATCTTCATCATATGCCTCTTGCTGAGCTTGCTGCTTCCTCCTCAACTCCTCCTCCATGTTGA 912 0.4068 MLQSYWKFKLKDLRFQLSRLYVFLTCTSPEFRFQDGGVSLVKEVKDFNRVNDIFHSEVQLLGHLHHRHLLALKGFSMGYKRLLIFDNIENGSLKEHLNDPLKTPLSWRMRLQIAVGVVAALEYLFLFIEPPRCHVSISSSNIMLDENFTAKLSDYGLLTCIGNSAPYSKDCTGQKNGNIVFQLGVLILELITGQSSEMEDPDLGNSYDSKELKSLLAVAKLCIKSRGKPAFTIPQLFRYLQKKFVSRTSSYGIISALGLEEAVIGSHCAESHTVLSEHHQAYPHLHHMPLAELAASSSTPPPC 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0471 303 Pfam Protein tyrosine and serine/threonine kinase 41 170 IPR001245 GO:0004672|GO:0006468
Sto12g0471 303 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 31 200 - -
Sto12g0471 303 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 197 245 - -
Sto12g0471 303 PANTHER OS01G0253100 PROTEIN 31 200 IPR045271 GO:0004714|GO:0006468
Sto12g0471 303 PANTHER OS01G0253100 PROTEIN 197 245 IPR045271 GO:0004714|GO:0006468
Sto12g0471 303 Gene3D Transferase(Phosphotransferase) domain 1 34 251 - -
Sto12g0471 303 SMART tyrkin_6 31 257 IPR020635 GO:0004713|GO:0006468
Sto12g0471 303 ProSiteProfiles Protein kinase domain profile. 1 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0471 303 SUPERFAMILY Protein kinase-like (PK-like) 35 200 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0471 Sto-Chr12 3068793 3073620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0471 33 240 Receptor kinase-like Gene Family AT3G19300 35.200 2.67e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Sto12g0471 PK_Tyr_Ser-Thr 9.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0471 - - aprc:113853565 301.212