Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0461 ATGCAGATAGTGATGAGTTCATTTGAGGAAGCAGCGGGATACGGCGCTGCAAAATCATACACATGGCTTGCCCTAAGGACGATATCGAAGCAATTCCGATGCCTGAAAGACGCAATATCGTGGCAAATAAAGGCGACGAGGAAGAGGCTTGGTGAGGAGGAATGCTTAGGAGGTAAGATGGAAGGTTCTAGACTGCGTTACGTGGATCATCATCTCCGCCAACAGCGTGCTCTGCAACAATTGGGGATGATGCAGCACAATGCTTGGAGGCCTCAGAGAGGCTTGCCTGAACGAGCTGTCTCCATTCTTCGTGCTTGGCTTTTTGAGCATTTCCTCCACCCGTAa 345 0.5014 MQIVMSSFEEAAGYGAAKSYTWLALRTISKQFRCLKDAISWQIKATRKRLGEEECLGGKMEGSRLRYVDHHLRQQRALQQLGMMQHNAWRPQRGLPERAVSILRAWLFEHFLHP 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0461 114 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 114 - -
Sto12g0461 114 Pfam Associated with HOX 1 40 IPR006563 -
Sto12g0461 114 Gene3D - 95 114 - -
Sto12g0461 114 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0461 Sto-Chr12 2971407 2971751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0461 1 114 Homeobox Transcription Factor Family AT2G35940 75.630 8.38e-59 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0461 - - tcc:18590208 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0722 7 5334718 5338418 Sto12g0461 12 2971407 2971751 CCT
Sto12g0461 12 2971407 2971751 Sto12g0461 12 2971407 2971751 ECH