Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0459 ATGGGTTTGTTGTTGAAAGAAGCCTTGAAGACTCTGTGCGGTCGGAATCAATGGTCTTATGCTGTGTTCTGGAAGATCGGCTGCCATAATCCTAAGTTGTTAATCTGGGAAGAATGCCATTATGAACCCTTGACATGCCCTTTTCCTCCGCGCATTGATGGAATTGGGACATCTGACTTGTCTTTTGGAGGTGGGGAAGGGGACAGAGTCTGTTCTTTGATTAACAGAATGATGGCGAATAATTCAGTCAATATTGCTGGAGAAGGGATAATTGGGCGGGCTGCATTTACAGGGAGTCATCAGTGGATTCTTTTGAACAGTTTTATGAGAGATACATACCCACCAGAGGTTTATAATGAGGTGCATCACCAATTTTCAGCTGGAATGCAGACTGTAGCGGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAACTTGGTTCTTTATTGGCAATAATGGAGAATATTGGATTTGTGAATGATGTGAAGAACTTAATCTTGCAATTGGGATGCGTCCCTGGTGTTCTTCTATCTGAAGATTATTCAGCAAAAGCTTCTGCTGAAGGACTTGGTGCAACGGTCACTGTTGGGGTGCCTGTGTCTGTAGATCTGTCAGTTATTACCTCAAATTGCAGTGCTTCAGTGGCTAATGGCTCCAACCAACAAAGAAATTCATCTCATACTTCCATCCCCATTGTTCAACAATCTCTTCCTCAAAGGGAAGAGATAAATAAACACCAGGTTTCTGTATTGACCCATCAAACCCCTAACCTGACTCAGATATTATCCAAGTACCAGGATAACCTCTGCCAACCTAAGGCAATTCCAATAACAAAACCAAACTTTATTGGCCAACTAGATAATAGAGTTGTGCAGGCGCAAGTCATACCCTCAAATCTTAATTCATGTCCTCAAGAGCCTTCTCTCTTGTGTGATTCAAGAACTGTGTTCAATGAATTAACTGGTTTTGGCCAATCAGGTCTGAGTGACTGCAGCAGAAATGTTATGGAACAACAAAACTTATCAGGGATTGGGAGTTGGAATTATGCCAATAATTCTCATATAAATGCATCAAGTGCCTTAAACATGACTCAACAGAAGACAAGCAAAGGCCGTATACCAGACCATAGTCAGAATTCTGTTAGTTCTCCATTACTTGGTGGAATCCCTATACATGGTGGAATGAGTAGCCTTTTAAAGTCAAATCTGATTACTAGCTCTGTTTCAGACCCTCCCAAAGTGTCTGTTCCTGATTTTTCTGGAATGCATAAAGCTGGGACTGGACTTCAAAATGATGATTCAACAAAAGCAGGGGGCTATTCTCTCACGAATTTGGCAAATCAATTAGGTACTAGTCACATGCCTCTAGAATGCTCTGATCAAAAGAATCTTCCGATGGATTTAAAGTGTTCTTATGACAAGATAGCACCAATAAACCCCATGATAGATTATAATTTGCTACATTCCCTAAAGATTCCATCTCTTAAAGTTGAGGAGCATGGGTCTATGAGTGATCACATCCAATGTTTTGTGAATGATGGCCTTAATATTGACAGTGCAAGTCAATCTTTCACGAAACAAGAAGCTTGTGCTCAACCTTCATCAGGCGATGATCTATTTGATGTCTTAGGTGtggattttaaaaacaaaatactgAGTGAAAACTGGGATAAGTTGCTTGCGGATGAATCAGATGTTAATGCAGAATTTCTGGATAAAATGGCAACCTGTGTGAATGTGCAGAGTATAGATCCTGATTGCTATTCAGTTAATGAAACACTATCAGATAGTGGCATCTTCTCTGGAAGGGGTACTGACCACCTTTTGGATGCTGTGGTCTCAAAAGCTCAATCTGCTCTGAAACAGGATTCTGATGATATGTCTTGCAGGACGACTTTGACTAGGATCAGTAGTGCCTCTGTTCCCTCTTCCACCCACAGGCAGGTTATGTCAGATCATGCCCTCAGTGGTTTGTTTGATTTTCCTAAGACTGAGTGTAAGTTAGGTGCAGCAGAAACTAGTTCTCTTAGGTCTGGATGTCAAAAAAATGATGCTGGAAGTTGTTCTCAAACTACTTCCATATATGGGTCACAACTTAGTTCATGGGTTGAGAATGTTAGCAATGTGAAGCGTGAAACTAGTGTTTCAACTGGATACTCCAAGCGACCGGATGAAGTTGGCAAATCAAATCGCAAAAGGCTTAAACCTGGAGAGAACCCCAGACCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGTTGCGGGAAATTGTGCCAAATGGGGCAAAATGTAGCATTGATGCGCTTCTTGAACGGACCATTAAGCATATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTGAAACAAACAGGGGATTCTAAGATTATTAATAAGGAAGGTGGACTGCTTCTGAAAGATAATTTTGAGGGAGGGGCTACATGGGCATATGAAGTTGGTTCACAATCAATGGTTTGCCCTATCATAGTTGAGGATCTGAATCCTCCTCGTCAGATGCTAGTGGAGATGCTTTGTGAGGAACGGGGTTTTTTCCTGGAGATTGCTGACTTGATCAGGGGGTTGGGTTTGACCATTTTGAAGGGGGTAATGGAAGCTCAAAATGACAAGGTCTGGGCACGCTTTGCTGTAGAGGCAAACCGGGACGTGACAAGGATGGAAATATTCATGTCATTGGTTCGTCTTCTTGATCAAACAGTGAAGGGTGGTGCATCTACATCAAACCAAATTGACAACAATATGATGGCTTATCACTCTTTCCAACCAGCTACCCAGATAGCAGCAACCGGGGGGCCTAATAGTCTACAATGA 2841 0.4189 MGLLLKEALKTLCGRNQWSYAVFWKIGCHNPKLLIWEECHYEPLTCPFPPRIDGIGTSDLSFGGGEGDRVCSLINRMMANNSVNIAGEGIIGRAAFTGSHQWILLNSFMRDTYPPEVYNEVHHQFSAGMQTVAVIPVLPHGVVQLGSLLAIMENIGFVNDVKNLILQLGCVPGVLLSEDYSAKASAEGLGATVTVGVPVSVDLSVITSNCSASVANGSNQQRNSSHTSIPIVQQSLPQREEINKHQVSVLTHQTPNLTQILSKYQDNLCQPKAIPITKPNFIGQLDNRVVQAQVIPSNLNSCPQEPSLLCDSRTVFNELTGFGQSGLSDCSRNVMEQQNLSGIGSWNYANNSHINASSALNMTQQKTSKGRIPDHSQNSVSSPLLGGIPIHGGMSSLLKSNLITSSVSDPPKVSVPDFSGMHKAGTGLQNDDSTKAGGYSLTNLANQLGTSHMPLECSDQKNLPMDLKCSYDKIAPINPMIDYNLLHSLKIPSLKVEEHGSMSDHIQCFVNDGLNIDSASQSFTKQEACAQPSSGDDLFDVLGVDFKNKILSENWDKLLADESDVNAEFLDKMATCVNVQSIDPDCYSVNETLSDSGIFSGRGTDHLLDAVVSKAQSALKQDSDDMSCRTTLTRISSASVPSSTHRQVMSDHALSGLFDFPKTECKLGAAETSSLRSGCQKNDAGSCSQTTSIYGSQLSSWVENVSNVKRETSVSTGYSKRPDEVGKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGDSKIINKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEAQNDKVWARFAVEANRDVTRMEIFMSLVRLLDQTVKGGASTSNQIDNNMMAYHSFQPATQIAATGGPNSLQ 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0459 946 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 946 - -
Sto12g0459 946 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 946 IPR043561 GO:0003700|GO:0006355
Sto12g0459 946 MobiDBLite consensus disorder prediction 711 747 - -
Sto12g0459 946 CDD bHLH_AtLHW_like 737 806 - -
Sto12g0459 946 MobiDBLite consensus disorder prediction 723 747 - -
Sto12g0459 946 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 733 782 IPR011598 GO:0046983
Sto12g0459 946 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 42 IPR025610 -
Sto12g0459 946 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 74 164 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0459 Sto-Chr12 2938481 2944546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0459 515 921 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.110 1.45e-122 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0459 - - aprc:113857443 1211.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0726 7 5379868 5385648 Sto12g0459 12 2938481 2944546 CCT
Sto12g0459 12 2938481 2944546 Sto12g0459 12 2938481 2944546 ECH