Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0456 ATGGAAGCTATCCGTACGAGTTTCGGCATTATTCTCATTTTTTGCCTCATTACAGTGGGTTTCGGTGCTACAAACCCAAATGATCTAAAAGTTCTGAATGATTTCAGAAAAGGGTTGCAGAATCCAGAACTTCTCAAATGGCCAAATAGAGGGAATGATCCATGTGGCCCTCCTACGTGGCCTTATGTGTTCTGCTCTGGTAATAGAGTCACACAGATTCAAGCCAAGTCTCTGGGTCTTAAAGGATCCTTACCTTCATCCTTTAACCAGCTCTCAGAACTCTATAACTTGGGTCTTCAACACAACAATCTCACTGGGATGTTACCTACTTTCAGTGGATTATCCAAATTGGAGTTTGCTTTCCTAACTGATAATCAATTTGATGGAATCCCCTCTGATTTCTTTGCAGGACTCACCAGTCTTCAGGTATTGTCTTTGGACCGAAATTCATTGAATGCAACTACTGGGTGGTCTCTTCCTGTGGATTTAGAAGAATCAGTACAATTAACCAATCTTTCTCTTCAAAGTTGTAATTTGGTTGGATCAGTGCCTGACTTTCTAGGCAGATTGCCATCTCTCACCAATCTGCGCCTTTCATATAATAGATTGTCTGGTACTATTCCTGCAAGTTTTGGTCAGTCTTCTATACAGGCTCTGTGGTTGAATAACCAAGTTGGTGGTGGCATGACTGGTCCTATTGATGTTATTGCTTCAATGACTTCTCTAACACAACTTTGGCTACATGGAAACCAATTCACTGGCACAATTCCACAGAATATTGGGGATCTAACTTCCTTGGTGGATCTTAACCTCAATGGTAATGAACTTGTTGGCTTCATCCCTGAATCCTTGGCTAATATGGAGCTTAAGAAATTGGATCTAAACAATAACCAGTTAATGGGTCCCATACCACTGTTCAAGACAGTTAATGTTTCTTATGCTTCCAATTCCTTTTGTCAAACTAAGCCTGGCCTTGAATGTGCCCCTGATGTTACTGCTCTATTATATTTTCTCAGTAATCTGAGTTACCCCTCTGTGCTCACTTCTAAATGGATTGGTAATGCACCATGTTCTGGGCCATGGCTTGGATTGAGCTGCAACCCAAAGTCACAGGTATCTATTATCAATTTCCCAAGACATCAGCTTAATGGTACTTTGAGTCCCTCACTTTCTAAGTTAGATTCACTCCTTGAAATTAGGCTTGCTGAGAATAGTTTAACTGGCGAAATTCCTACTAGTTTCACTGAATTGAAATCTTTGAGGTTGTTGGATTTAAGTTATAACAATCTTGCGCCCCCATTGCCAAATTTCCGTAGTGGTGTGAAGATTATGATTGATGGCAACCCGTTTTTTAGTACTAACCAAACTGGAAAGAGTCCTGCTGCGCCTACTACACATAACCCGTCACCTCCATCCTCAAGTCATAGTCCAAGCTCAAATTCATCAGGGTCTGTACAAGGACAATCCCAACACAATGAATCTAAAATGTACATAACAATAGCAGCAGTGGCTGGAGCTGGAGTTTTTGTATTTGCTGCTATTTTGGCTGTTTTTCTATTCATATattgctcaaagaagaaaaaagccTTGTTGGAGGAACCTAATGCTATTGTGGTTCACCCTCGAGACCCATCTGATCCAAAAGATATGGTTAAAATTTCAGTTTCAAATAAGACTACTGAAAGTTTATCAGCAAAGACTGGGACAAGTGCTTCGAATAACATTATTGGTGAATCTGAAAATCCTCATGTAATTGATGCTGGTAACCTTGTCATCTCTGTTCAAGTTTTACGCAAGGTTACCAAAAACTTTTCCCCAGAAAATGAGCTAGGCCATGGTGGGTTTGGAACTGTTTATAAGGGAGAGCTAGAAGATGGGACAAAAATAGCAGTGAAGAGAATGGAGACTGGAACTATGAGCAGTCAAGGACTGCATGAGTTTCAAGCTGAAATAGCTGTTCTTTCCAAGGTTCGTCACCGGCATTTGGTTTCTTTGTTAGGATACTCCGTTGAAGGCAATGAAAGACTTTTAGTTTACGAGTACATGCCTCTAGGTGCTCTAAGCAAGCATCTTTTTCATTGGAAAAGCTTGAAGTTGGAGCCTTTGTCTTGGTCACAGAGGCTGGTGATAGCACTAGATGTTGCTAGAGGGATGGAATACCTCCATGGTCTTGCCCGCCAGATCTTCATACACCGAGACCTCAAGCCTTCTAATATTCTACTTGGTGATGATTTGCGGGCAAAAGTTTCAGATTTTGGTCTGGTGAAACTTGCCCCAGATGGTAAGAAGTCTATAGCCACTAAACTTGCTGGGACATTTGGATACCTTGCCCCTGAATATGCAGTGATGGGAAAGATTACCACTAAAGTTGATGTGTTCAGCTATGGTGTGGTGTTGATGGAACTTGTGACCGGACGAATGGCTCTTGATGAAAGCCGGCCAGAGGAGAGCCGATACTTGGTTGAATGGTTTTGGAAGATTAAATCAAGCAAACAACAACTTATGGCTGCAATTGATCCAGCTCTTGAGGCAACCGAAGAGACATTTGAGAGTATCTCTATTATAGCCGAACTTGCTGGACATTGCACTTCTAGGGAACCAAACCATCGGCCAAATATGTGTCATGTGGTTTCTGTACTGTCACCATTAGTAGAGAAATGGATTCCCATTGATGAGAATGTAGATAGTTTTACTGGCATTGACTTAAATCAACCACTTCCCCATATGTTGAAGGATTGGAAGGATGCAGAAGGCAGAGATGTTAGCCATACTAGTCTCGAAGACAGCAATAGCAGTATACCAGTGAGGCCAGTGGGGTTTGCAGACTCATTTTCTTCTGCAGATGCTCGATAA 2853 0.4136 MEAIRTSFGIILIFCLITVGFGATNPNDLKVLNDFRKGLQNPELLKWPNRGNDPCGPPTWPYVFCSGNRVTQIQAKSLGLKGSLPSSFNQLSELYNLGLQHNNLTGMLPTFSGLSKLEFAFLTDNQFDGIPSDFFAGLTSLQVLSLDRNSLNATTGWSLPVDLEESVQLTNLSLQSCNLVGSVPDFLGRLPSLTNLRLSYNRLSGTIPASFGQSSIQALWLNNQVGGGMTGPIDVIASMTSLTQLWLHGNQFTGTIPQNIGDLTSLVDLNLNGNELVGFIPESLANMELKKLDLNNNQLMGPIPLFKTVNVSYASNSFCQTKPGLECAPDVTALLYFLSNLSYPSVLTSKWIGNAPCSGPWLGLSCNPKSQVSIINFPRHQLNGTLSPSLSKLDSLLEIRLAENSLTGEIPTSFTELKSLRLLDLSYNNLAPPLPNFRSGVKIMIDGNPFFSTNQTGKSPAAPTTHNPSPPSSSHSPSSNSSGSVQGQSQHNESKMYITIAAVAGAGVFVFAAILAVFLFIYCSKKKKALLEEPNAIVVHPRDPSDPKDMVKISVSNKTTESLSAKTGTSASNNIIGESENPHVIDAGNLVISVQVLRKVTKNFSPENELGHGGFGTVYKGELEDGTKIAVKRMETGTMSSQGLHEFQAEIAVLSKVRHRHLVSLLGYSVEGNERLLVYEYMPLGALSKHLFHWKSLKLEPLSWSQRLVIALDVARGMEYLHGLARQIFIHRDLKPSNILLGDDLRAKVSDFGLVKLAPDGKKSIATKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELVTGRMALDESRPEESRYLVEWFWKIKSSKQQLMAAIDPALEATEETFESISIIAELAGHCTSREPNHRPNMCHVVSVLSPLVEKWIPIDENVDSFTGIDLNQPLPHMLKDWKDAEGRDVSHTSLEDSNSSIPVRPVGFADSFSSADAR 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0456 950 Pfam Protein tyrosine and serine/threonine kinase 607 879 IPR001245 GO:0004672|GO:0006468
Sto12g0456 950 ProSitePatterns Protein kinases ATP-binding region signature. 610 632 IPR017441 GO:0005524
Sto12g0456 950 Gene3D Ribonuclease Inhibitor 329 455 IPR032675 -
Sto12g0456 950 SUPERFAMILY L domain-like 328 438 - -
Sto12g0456 950 PANTHER OSJNBA0070M12.3 PROTEIN 8 950 - -
Sto12g0456 950 SMART LRR_typ_2 263 286 IPR003591 -
Sto12g0456 950 SMART LRR_typ_2 114 137 IPR003591 -
Sto12g0456 950 SMART LRR_typ_2 190 214 IPR003591 -
Sto12g0456 950 SMART LRR_typ_2 417 439 IPR003591 -
Sto12g0456 950 SMART LRR_typ_2 91 113 IPR003591 -
Sto12g0456 950 SMART LRR_typ_2 138 166 IPR003591 -
Sto12g0456 950 SMART LRR_typ_2 239 262 IPR003591 -
Sto12g0456 950 Gene3D Transferase(Phosphotransferase) domain 1 682 894 - -
Sto12g0456 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Sto12g0456 950 Pfam Leucine rich repeat 241 299 IPR001611 GO:0005515
Sto12g0456 950 MobiDBLite consensus disorder prediction 454 490 - -
Sto12g0456 950 SUPERFAMILY L domain-like 24 307 - -
Sto12g0456 950 Pfam Leucine rich repeat N-terminal domain 329 367 IPR013210 -
Sto12g0456 950 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Sto12g0456 950 ProSiteProfiles Protein kinase domain profile. 604 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0456 950 SUPERFAMILY Protein kinase-like (PK-like) 587 880 IPR011009 -
Sto12g0456 950 MobiDBLite consensus disorder prediction 921 950 - -
Sto12g0456 950 PANTHER OSJNBA0070M12.3 PROTEIN 8 950 - -
Sto12g0456 950 SMART serkin_6 604 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0456 950 CDD STKc_IRAK 610 883 - -
Sto12g0456 950 Gene3D Ribonuclease Inhibitor 26 325 IPR032675 -
Sto12g0456 950 Gene3D Phosphorylase Kinase; domain 1 552 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0456 Sto-Chr12 2913246 2916739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0456 82 880 Receptor kinase-like Gene Family AT5G07280 33.292 2.49e-93 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Sto12g0456 PK_Tyr_Ser-Thr 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0456 - - gmx:100785090 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0456 12 2913246 2916739 Sto12g0456 12 2913246 2916739 ECH