Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0452 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGCGGAGCTTTTGGAGCTGCTATTCTAGTCAATCACAGAGCCGAGAAGAAGAAATATGTGTTGAAGAAAATCAGGCTAGCTCGACAGACTGAACGCTGCAGGAGATCTGCTCATCAAGAGATGGCCCTTATTGCTCGAATCCAGCACCCTTACATTGTGGAATTTAAGGAAGCATGGGTTGAGAAGGGTTGCTACGTCTGCATTGTCACTGGATACTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAAATCTAATGGGGTTTACTTTCCTGAGGAGAAACTCTGTAAGTGGTTTACTCAATTGCTGTTGGCAGTTGAATACCTGCATTCTAACTTTGTTTTACATCGCGACCTGAAGTGTTCCAACATCTTTCTTACCAAGGATCAGGATGTTCGCCTAGGTGATTTTGGGCTAGCTAAGACGCTAAAAGCAGATGATCTGGCCTCTTCGGTGGTAGGAACTCCCAATTACATGTGTCCTGAGTTGCTAGCAGATATTCCTTATGGATTCAAATCTGATATTTGGTCACTAGGCTGCTGTATTTATGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTTGATATGGCAGGATTGATAAGCAAGATAAACCGTTCCTCTATTGGCCCTTTGCCTTCCTGTTATTCCCCATCCTTGAAAACATTGATAAAGGGCATGCTAAGAAAAAACCCTGAGCACCGACCAACAGCATCTGAGGTGTTAAAGCATCCTTATTTGCAACCTTATGTTGAACAGTATCGTCCATCTTTCAGTCCTCCAACTGCCTGTTCTCCTGAAAAGCCAATTTCTGCTGCTCATGATCCTCGAAGAAATATGGCTGAAAGTCAAAACAGTTGCAGTTCAAGTAGTGACAAAGATAGTTCGATGTCAAATGAGAGAAGCATTTCAACAGTGGTGCTGAAGTGTGATCACAAAACTACTGAGACAGACCTGGCCTCTATGGATGATGAAGATGACTCTGAGCATAACCTGCTTAGTGAAGAAGAAAATAGATTGAGCACTGGCAATGCCAAAAAAGAAGGCCAAGAGATCATGAAACCATCACATAATGAACATCGATTAGTTGTTGAATCTAAGCAgccaaaaacaattaaaaatataatgatgGCACTAAAAGAAGGGAAAGCTAGAGAAAATGGTTCTCCAATGAGAGGCAACCGCATAAAGGCTGGTGGTGTATCTACACAGAAAGCAAACACAGAGACATTGCCTAAATTGCCCAAGTATAATGCTCCTACTCCTGGTTTCAAGCCTAATTCAGAGTCTCCAACTGTTGTACCTGCAAAGACCTCCCCTGATCCTACAAAGAGAATGCTGGGGTTACATCCTTTAAAGAATCAGGTACTCATGATGGACTCTCCACCAAAAACTAAACCCAGACATGATGGGACTCCCCCGTCTGGTCCAGTTAAACAAGTAGAAGGAGATGGAGTTTTTTCCAAGCTTAGGCTAAGGACCCCCCCGAGCTTACTTAGACAACCTTCATTTCGAGGAGGAATGAGGCAGGGTGGGCTTGATGTTCCCGATTCAGCTAGTGATGCAGAGAAGTTAGGTCCAAATAAAATACCTCAGGAGCCTGACAAGAGTCATTGTCAGTTGTCCAATGGTCATGTACCGCGCGTTTCTAGAGAGATTTCAGAGCCTCAGAAGGCGTTTGAAAAATGTTCCAAAGGAATGCAAACAGATAGCAGCAATTCTGTTTCATCATCAGTGTCTATTCAAGGCTTTGAACTTTCTGATGATGCATCAAATTTTATTGACATGAGAGAACCGACGCCTCCTGAACATGAGAATGCAACACACATTGAAAGTGTAAAATCACATGCAGACAGCAGCCCACCTACTACCTTTTTGCATAGTGAGATGGCTGAAAATATGTCCAGACAGACTTCTGAGGCCACTGTGAATCATCAGAATTCCATTACTAGTAATGACAAAGTAGGTTGTTTAACTCCTGGTCACCCAGTTCAAGATTCTAAGGAAATGTTTGCTTTTGAAGAAGGTCTCTCCATCAGCCAGACCAGTATATCTGCTGTCACCTCTTATGATAATAGATCAACAGGTCCCTCTGTTGAAGCCACTGAAAAAATTGAAGATCTTCAAGATACTAATAAGCCAGCGTCTTCAGCCAATTCTCTTAAACTTCAACTCCTAAGTTCTGGAGAGAAGTTTGTCTGTGAAGAAGCTACTCCAGTAAGCACGCCCAAATCCTTGTGTATGTCCACTGGCGATGACAAGTTCACCGTAACAGAAAGGCTGTCATCAGTGACTGAAAATGCCCCCCCAATTATCTCTACCAATAGCCAGAAAGGTTTGCAAGAAGAGAAAGGAACCGTTTTGCAGAATCCAATGACAGAAAGGGCAGCTGTTGGTAATCTTCCTCCTGCTTTTGATGATGTCATCCATGTTATACGGCATAGCAGTTACCGTGTTGGGAGTGAACAGCCAATAAAGGAATCTGTGGAGATGGGAGTTCAAAATGTGGATGTTGGTAAATTTATCAACGAGTTAGAAATGAGAAACATGAGCACTCCTCGGACCCTTAAATCTTCGAGTTGCTCGGAAGCCATGAGCTTGAAGTCGAACATTTCCGATCAATTAGAAGTGAGAAATATGAGCACTCCTCCTCCAGCCCTTAAACCTTCAAGTTGCACTGATGCTTTGAGCACCAAGTCAAATATTTCTGATAATTCTGGTGTTAAGGAAGTAGATGTGAAAAATCCTGTTCCTGTAGCTTCAAAAGCTGATTCCCCTGATGTGAGTAAAGATAACTCTTCAATGAGTGAAGAGGAAACACCGGCAAAGGAGACATTGGATGTTAAGTCATTTAGGCAGAGAGCAGACGCACTTGAAGGGCTGTTAGAGTTGTCTGCAGAGTTGCTGCAGCATAATAGATTGGAGGAACTGGCAGTTGTTCTAAagccctttgggaaagataaggTATCCCCAAGGGAGACAGCTATTTGGTTAGCTAAGAGCTTAAAGGGAATGATGAGCGAGGACAATGGAGGACGCTGTTCCTGA 3093 0.4268 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGVYFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPTASEVLKHPYLQPYVEQYRPSFSPPTACSPEKPISAAHDPRRNMAESQNSCSSSSDKDSSMSNERSISTVVLKCDHKTTETDLASMDDEDDSEHNLLSEEENRLSTGNAKKEGQEIMKPSHNEHRLVVESKQPKTIKNIMMALKEGKARENGSPMRGNRIKAGGVSTQKANTETLPKLPKYNAPTPGFKPNSESPTVVPAKTSPDPTKRMLGLHPLKNQVLMMDSPPKTKPRHDGTPPSGPVKQVEGDGVFSKLRLRTPPSLLRQPSFRGGMRQGGLDVPDSASDAEKLGPNKIPQEPDKSHCQLSNGHVPRVSREISEPQKAFEKCSKGMQTDSSNSVSSSVSIQGFELSDDASNFIDMREPTPPEHENATHIESVKSHADSSPPTTFLHSEMAENMSRQTSEATVNHQNSITSNDKVGCLTPGHPVQDSKEMFAFEEGLSISQTSISAVTSYDNRSTGPSVEATEKIEDLQDTNKPASSANSLKLQLLSSGEKFVCEEATPVSTPKSLCMSTGDDKFTVTERLSSVTENAPPIISTNSQKGLQEEKGTVLQNPMTERAAVGNLPPAFDDVIHVIRHSSYRVGSEQPIKESVEMGVQNVDVGKFINELEMRNMSTPRTLKSSSCSEAMSLKSNISDQLEVRNMSTPPPALKPSSCTDALSTKSNISDNSGVKEVDVKNPVPVASKADSPDVSKDNSSMSEEETPAKETLDVKSFRQRADALEGLLELSAELLQHNRLEELAVVLKPFGKDKVSPRETAIWLAKSLKGMMSEDNGGRCS 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0452 1030 MobiDBLite consensus disorder prediction 332 362 - -
Sto12g0452 1030 MobiDBLite consensus disorder prediction 884 923 - -
Sto12g0452 1030 MobiDBLite consensus disorder prediction 512 594 - -
Sto12g0452 1030 MobiDBLite consensus disorder prediction 579 594 - -
Sto12g0452 1030 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Sto12g0452 1030 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Sto12g0452 1030 MobiDBLite consensus disorder prediction 272 317 - -
Sto12g0452 1030 Gene3D Transferase(Phosphotransferase) domain 1 90 388 - -
Sto12g0452 1030 MobiDBLite consensus disorder prediction 398 462 - -
Sto12g0452 1030 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0452 1030 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0452 1030 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 1013 - -
Sto12g0452 1030 MobiDBLite consensus disorder prediction 884 963 - -
Sto12g0452 1030 CDD STKc_Nek 7 262 - -
Sto12g0452 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Sto12g0452 1030 SUPERFAMILY Protein kinase-like (PK-like) 4 319 IPR011009 -
Sto12g0452 1030 MobiDBLite consensus disorder prediction 946 963 - -
Sto12g0452 1030 MobiDBLite consensus disorder prediction 293 317 - -
Sto12g0452 1030 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 1013 - -
Sto12g0452 1030 MobiDBLite consensus disorder prediction 347 362 - -
Sto12g0452 1030 MobiDBLite consensus disorder prediction 438 452 - -
Sto12g0452 1030 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0452 1030 MobiDBLite consensus disorder prediction 474 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0452 Sto-Chr12 2891762 2897424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0452 14 263 MAP Kinase Kinase Kinase AT1G53570 31.765 1.68e-36 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Sto12g0452 Pkinase 4.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0452 K08857 - gmx:100784761 1363.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0738 7 5473697 5475701 Sto12g0452 12 2891762 2897424 CCT
Sto12g0452 12 2891762 2897424 Sto12g0452 12 2891762 2897424 ECH