Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0413 ATGGATATTCCTGAAAGAGAAACTTCGTATTATGCCAAGCTTACCCAACAAAAACCACCTTCATCTTCACCCCTGCCTCTACCATCGCCAGAGCAAGAAGAACCAGAACCCAAAATTTCGAAACAGAACTCCATTCTCTCCCTCACGCTCGACGAAATCCAATGCAAGAGTGGAATAAGCTTTGGCTCCATGAGCATGGACGAATTCCTCACCAGCATTTGGAGTTCCGAAGATGTCAAACTCACCTCACAATCACAGATCTCTCACGACGATTCAGCTCAAGACAAAAGTGTAGCAAAAGCAACAGATCCCACCCTTCTTCCCCAGCAAGGATCCTTATGTGTTCCTCCACCGATCTGCAAGAAAACCGTGGATGAGATATGGTGCGAGATCCACAAACCACCAGAAAACGAACCTAAAGAAATCACAAAGAACGAGACTCTGAAAAAGGAGCAAACATTGGGGGAAATGACATTGGAGGATTTCCTAATAAAAGCTGGGGTAGTGCAGGAGTCTTCATTCCAGAATCAAACcaaattagggttagggttttataACGAGAGAAACATTTTGGGGAAAGAAATTGCAGAAACGCCAATGTTGCTTTGGCAGAGGAATGGGGTAATGGTGAGAGAAGGCAGTAGTAGCATGAGGGAGACATGTGGGTTTAGTGGCAATGGTGGTAGGAAGAGGATAATTGATGGCCCTCCGGAGGTAGTGGTGGAGCGCAGGCAACGCAGAATGTTGAAGAATCGAGAATCTGCGGCGAGATCTCGAGCAAGAAGACAGGCATATACAGTGGAGTTAGAGGCAGAGTTAACTCAGCTAAGACAAGAGAATGAACAACTCAAACAGATTCTGGCCGAAGGTGAGCAAAGGAGAAAACAAGAGATAGCTCAAAGAAAGCGAACAACTAGAGCTCAAAAAAGGGTAGAAAAGTTGAAGGCAATGAGGAGGATGATGAGTGCAGCCTGGTAA 978 0.4479 MDIPERETSYYAKLTQQKPPSSSPLPLPSPEQEEPEPKISKQNSILSLTLDEIQCKSGISFGSMSMDEFLTSIWSSEDVKLTSQSQISHDDSAQDKSVAKATDPTLLPQQGSLCVPPPICKKTVDEIWCEIHKPPENEPKEITKNETLKKEQTLGEMTLEDFLIKAGVVQESSFQNQTKLGLGFYNERNILGKEIAETPMLLWQRNGVMVREGSSSMRETCGFSGNGGRKRIIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELTQLRQENEQLKQILAEGEQRRKQEIAQRKRTTRAQKRVEKLKAMRRMMSAAW 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0413 325 PANTHER BZIP TRANSCRIPTION FACTOR 38 189 - -
Sto12g0413 325 PANTHER BZIP TRANSCRIPTION FACTOR 223 325 - -
Sto12g0413 325 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 223 325 IPR043452 GO:0003700|GO:0045893
Sto12g0413 325 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 38 189 IPR043452 GO:0003700|GO:0045893
Sto12g0413 325 SUPERFAMILY Leucine zipper domain 243 287 IPR046347 GO:0003700|GO:0006355
Sto12g0413 325 SMART brlzneu 239 311 IPR004827 GO:0003700|GO:0006355
Sto12g0413 325 MobiDBLite consensus disorder prediction 1 42 - -
Sto12g0413 325 Pfam bZIP transcription factor 243 290 IPR004827 GO:0003700|GO:0006355
Sto12g0413 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 241 285 IPR004827 GO:0003700|GO:0006355
Sto12g0413 325 Coils Coil 262 300 - -
Sto12g0413 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 246 261 IPR004827 GO:0003700|GO:0006355
Sto12g0413 325 Gene3D - 241 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0413 Sto-Chr12 2626540 2629267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0413 1 325 bZIP Transcription Factor Family AT3G44460 43.466 4.91e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto12g0413 bZIP_1 6.6e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0413 K14432 - gmx:100799576 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0413 12 2626540 2629267 Sto12g0413 12 2626540 2629267 ECH